Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.16□□□□□ -0.14
CAPN3P20807 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.16□□□□□ -0.14
CAPN3P20807 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.16□□□□□ -0.14
CAPN3P20807 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CAPN3P20807 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 COL6A4P2-202ENST00000504443 2753 ntBASIC14.16□□□□□ -0.14
CAPN3P20807 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.16□□□□□ -0.14
CAPN3P20807 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 ACTBP11-201ENST00000436287 1126 ntBASIC14.16□□□□□ -0.14
CAPN3P20807 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CAPN3P20807 AC131206.1-201ENST00000538078 1211 ntBASIC14.16□□□□□ -0.14
CAPN3P20807 AC092552.1-201ENST00000547243 906 ntBASIC14.16□□□□□ -0.14
CAPN3P20807 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.16□□□□□ -0.14
CAPN3P20807 AC023310.3-201ENST00000557027 670 ntBASIC14.16□□□□□ -0.14
CAPN3P20807 AC100756.1-201ENST00000562736 682 ntBASIC14.16□□□□□ -0.14
CAPN3P20807 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.16□□□□□ -0.14
CAPN3P20807 AC138749.3-201ENST00000567691 622 ntBASIC14.16□□□□□ -0.14
CAPN3P20807 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.16□□□□□ -0.14
CAPN3P20807 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
CAPN3P20807 BRI3BPP1-201ENST00000594224 787 ntBASIC14.16□□□□□ -0.14
CAPN3P20807 AC116165.1-201ENST00000611806 668 ntBASIC14.16□□□□□ -0.14
CAPN3P20807 MIR6787-201ENST00000616675 61 ntBASIC14.16□□□□□ -0.14
CAPN3P20807 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CAPN3P20807 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CAPN3P20807 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CAPN3P20807 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CAPN3P20807 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CAPN3P20807 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CAPN3P20807 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 MRPL37P1-201ENST00000592451 1337 ntBASIC14.15□□□□□ -0.14
CAPN3P20807 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.15□□□□□ -0.14
CAPN3P20807 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CAPN3P20807 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CAPN3P20807 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.15□□□□□ -0.14
CAPN3P20807 AGAP10P-201ENST00000454844 2418 ntBASIC14.15□□□□□ -0.14
CAPN3P20807 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.15□□□□□ -0.14
CAPN3P20807 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CAPN3P20807 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CAPN3P20807 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CAPN3P20807 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CAPN3P20807 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.15□□□□□ -0.14
CAPN3P20807 AC027612.1-201ENST00000445234 2395 ntBASIC14.15□□□□□ -0.14
CAPN3P20807 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
CAPN3P20807 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.15□□□□□ -0.14
CAPN3P20807 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.15□□□□□ -0.14
CAPN3P20807 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CAPN3P20807 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.15□□□□□ -0.14
CAPN3P20807 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CAPN3P20807 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CAPN3P20807 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.15□□□□□ -0.14
CAPN3P20807 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.15□□□□□ -0.14
CAPN3P20807 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.15□□□□□ -0.14
CAPN3P20807 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.15□□□□□ -0.14
CAPN3P20807 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
CAPN3P20807 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.15□□□□□ -0.14
CAPN3P20807 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms