Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.91□□□□□ -0.18
NCK1P16333 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NCK1P16333 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 AL591122.2-201ENST00000624125 1853 ntBASIC13.91□□□□□ -0.18
NCK1P16333 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NCK1P16333 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NCK1P16333 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.9□□□□□ -0.18
NCK1P16333 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.9□□□□□ -0.18
NCK1P16333 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.9□□□□□ -0.18
NCK1P16333 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NCK1P16333 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.9□□□□□ -0.18
NCK1P16333 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NCK1P16333 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.9□□□□□ -0.18
NCK1P16333 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NCK1P16333 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NCK1P16333 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.9□□□□□ -0.18
NCK1P16333 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.9□□□□□ -0.18
NCK1P16333 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.9□□□□□ -0.18
NCK1P16333 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.9□□□□□ -0.18
NCK1P16333 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.9□□□□□ -0.18
NCK1P16333 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.9□□□□□ -0.18
NCK1P16333 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 SRD5A3P1-201ENST00000603021 949 ntBASIC13.9□□□□□ -0.18
NCK1P16333 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.9□□□□□ -0.18
NCK1P16333 AL590560.3-201ENST00000623350 461 ntBASIC13.9□□□□□ -0.18
NCK1P16333 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.9□□□□□ -0.18
NCK1P16333 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NCK1P16333 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.9□□□□□ -0.18
NCK1P16333 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NCK1P16333 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.9□□□□□ -0.18
NCK1P16333 DMBT1P1-203ENST00000636837 4628 ntBASIC13.9□□□□□ -0.18
NCK1P16333 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 LINC02486-201ENST00000604157 3000 ntBASIC13.9□□□□□ -0.18
NCK1P16333 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.9□□□□□ -0.18
NCK1P16333 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NCK1P16333 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.9□□□□□ -0.19
NCK1P16333 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
NCK1P16333 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
NCK1P16333 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.89□□□□□ -0.19
NCK1P16333 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.89□□□□□ -0.19
NCK1P16333 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
NCK1P16333 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.89□□□□□ -0.19
NCK1P16333 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.89□□□□□ -0.19
NCK1P16333 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NCK1P16333 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NCK1P16333 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NCK1P16333 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.89□□□□□ -0.19
NCK1P16333 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.89□□□□□ -0.19
NCK1P16333 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.89□□□□□ -0.19
NCK1P16333 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
NCK1P16333 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.89□□□□□ -0.19
NCK1P16333 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.89□□□□□ -0.19
NCK1P16333 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.89□□□□□ -0.19
NCK1P16333 AC097493.3-201ENST00000509725 367 ntBASIC13.89□□□□□ -0.19
NCK1P16333 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NCK1P16333 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.89□□□□□ -0.19
NCK1P16333 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.89□□□□□ -0.19
NCK1P16333 AC093813.1-201ENST00000605066 256 ntBASIC13.89□□□□□ -0.19
NCK1P16333 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.89□□□□□ -0.19
NCK1P16333 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms