Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPRFP10586 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPRFP10586 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPRFP10586 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.33■□□□□ 0.2
PTPRFP10586 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PTPRFP10586 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PTPRFP10586 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
PTPRFP10586 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPRFP10586 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRFP10586 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PTPRFP10586 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRFP10586 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRFP10586 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPRFP10586 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPRFP10586 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPRFP10586 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PTPRFP10586 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRFP10586 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRFP10586 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRFP10586 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRFP10586 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PTPRFP10586 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRFP10586 HYMAI-201ENST00000635591 3347 ntBASIC16.32■□□□□ 0.2
PTPRFP10586 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRFP10586 USP17L6P-201ENST00000382470 1197 ntBASIC16.32■□□□□ 0.2
PTPRFP10586 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PTPRFP10586 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPRFP10586 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPRFP10586 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPRFP10586 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC16.32■□□□□ 0.2
PTPRFP10586 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPRFP10586 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPRFP10586 IGHEP2-201ENST00000519308 1256 ntBASIC16.32■□□□□ 0.2
PTPRFP10586 AL512310.5-201ENST00000551999 515 ntBASIC16.32■□□□□ 0.2
PTPRFP10586 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.32■□□□□ 0.2
PTPRFP10586 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRFP10586 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC16.32■□□□□ 0.2
PTPRFP10586 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPRFP10586 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRFP10586 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPRFP10586 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PTPRFP10586 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRFP10586 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PTPRFP10586 MTHFR-210ENST00000641407 2387 ntBASIC16.32■□□□□ 0.2
PTPRFP10586 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRFP10586 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRFP10586 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRFP10586 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRFP10586 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PTPRFP10586 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPRFP10586 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRFP10586 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRFP10586 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRFP10586 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PTPRFP10586 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRFP10586 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.31■□□□□ 0.2
PTPRFP10586 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.31■□□□□ 0.2
PTPRFP10586 RN7SL147P-201ENST00000487345 298 ntBASIC16.31■□□□□ 0.2
PTPRFP10586 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC16.31■□□□□ 0.2
PTPRFP10586 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPRFP10586 FAM86KP-201ENST00000509817 987 ntBASIC16.31■□□□□ 0.2
PTPRFP10586 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC16.31■□□□□ 0.2
PTPRFP10586 AC006548.2-201ENST00000605217 529 ntBASIC16.31■□□□□ 0.2
PTPRFP10586 AP000769.1-203ENST00000637245 208 ntBASIC16.31■□□□□ 0.2
PTPRFP10586 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PTPRFP10586 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.31■□□□□ 0.2
PTPRFP10586 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPRFP10586 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRFP10586 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRFP10586 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRFP10586 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PTPRFP10586 AC068760.1-201ENST00000493579 1953 ntBASIC16.31■□□□□ 0.2
PTPRFP10586 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRFP10586 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PTPRFP10586 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PTPRFP10586 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRFP10586 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PTPRFP10586 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPRFP10586 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRFP10586 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PTPRFP10586 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PTPRFP10586 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPRFP10586 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRFP10586 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PTPRFP10586 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPRFP10586 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRFP10586 ABCD1P4-201ENST00000399687 604 ntBASIC16.31■□□□□ 0.2
PTPRFP10586 LINP1-201ENST00000417112 917 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPRFP10586 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPRFP10586 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.31■□□□□ 0.2
PTPRFP10586 NME6-208ENST00000435684 599 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPRFP10586 GOLGA6L16P-201ENST00000441780 1299 ntBASIC16.31■□□□□ 0.2
PTPRFP10586 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPRFP10586 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPRFP10586 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPRFP10586 AC068831.5-201ENST00000557387 328 ntBASIC16.31■□□□□ 0.2
PTPRFP10586 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPRFP10586 AP005212.2-201ENST00000584979 510 ntBASIC16.31■□□□□ 0.2
PTPRFP10586 AL031673.1-201ENST00000611460 466 ntBASIC16.31■□□□□ 0.2
PTPRFP10586 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms