Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPN1P07384 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CAPN1P07384 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPN1P07384 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPN1P07384 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPN1P07384 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CAPN1P07384 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CAPN1P07384 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
CAPN1P07384 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.51□□□□□ -0.09
CAPN1P07384 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.51□□□□□ -0.09
CAPN1P07384 FAM21FP-201ENST00000426241 1131 ntBASIC14.51□□□□□ -0.09
CAPN1P07384 C2orf27AP3-201ENST00000434123 579 ntBASIC14.51□□□□□ -0.09
CAPN1P07384 EIF3FP3-201ENST00000434851 1086 ntBASIC14.51□□□□□ -0.09
CAPN1P07384 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.51□□□□□ -0.09
CAPN1P07384 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CAPN1P07384 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.51□□□□□ -0.09
CAPN1P07384 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.51□□□□□ -0.09
CAPN1P07384 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CAPN1P07384 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.51□□□□□ -0.09
CAPN1P07384 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.51□□□□□ -0.09
CAPN1P07384 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.51□□□□□ -0.09
CAPN1P07384 AL354718.3-201ENST00000616414 581 ntBASIC14.51□□□□□ -0.09
CAPN1P07384 CR382287.1-201ENST00000623954 586 ntBASIC14.51□□□□□ -0.09
CAPN1P07384 AC008687.7-202ENST00000637404 953 ntBASIC14.51□□□□□ -0.09
CAPN1P07384 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPN1P07384 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.51□□□□□ -0.09
CAPN1P07384 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CAPN1P07384 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CAPN1P07384 AC107918.4-201ENST00000641966 3141 ntBASIC14.51□□□□□ -0.09
CAPN1P07384 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.51□□□□□ -0.09
CAPN1P07384 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPN1P07384 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPN1P07384 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPN1P07384 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CAPN1P07384 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN1P07384 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
CAPN1P07384 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
CAPN1P07384 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.5□□□□□ -0.09
CAPN1P07384 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.5□□□□□ -0.09
CAPN1P07384 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.5□□□□□ -0.09
CAPN1P07384 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CAPN1P07384 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.5□□□□□ -0.09
CAPN1P07384 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.5□□□□□ -0.09
CAPN1P07384 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.5□□□□□ -0.09
CAPN1P07384 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.5□□□□□ -0.09
CAPN1P07384 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 AC006001.1-201ENST00000325130 474 ntBASIC14.5□□□□□ -0.09
CAPN1P07384 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.5□□□□□ -0.09
CAPN1P07384 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.5□□□□□ -0.09
CAPN1P07384 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.5□□□□□ -0.09
CAPN1P07384 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
CAPN1P07384 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CAPN1P07384 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.5□□□□□ -0.09
CAPN1P07384 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.5□□□□□ -0.09
CAPN1P07384 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 KRT18P25-201ENST00000508931 1278 ntBASIC14.5□□□□□ -0.09
CAPN1P07384 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.5□□□□□ -0.09
CAPN1P07384 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.5□□□□□ -0.09
CAPN1P07384 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.5□□□□□ -0.09
CAPN1P07384 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.5□□□□□ -0.09
CAPN1P07384 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.5□□□□□ -0.09
CAPN1P07384 DUX4L45-201ENST00000566406 1057 ntBASIC14.5□□□□□ -0.09
CAPN1P07384 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.5□□□□□ -0.09
CAPN1P07384 MIR4525-201ENST00000580000 75 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms