Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 AC005962.1-201ENST00000584100 773 ntBASIC14.82□□□□□ -0.04
HLA-DQB2P05538 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQB2P05538 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 BTBD6P1-201ENST00000412176 1267 ntBASIC14.81□□□□□ -0.04
HLA-DQB2P05538 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 RBM8B-201ENST00000555532 525 ntBASIC14.81□□□□□ -0.04
HLA-DQB2P05538 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 AL008721.1-201ENST00000609964 604 ntBASIC14.81□□□□□ -0.04
HLA-DQB2P05538 AC005695.3-201ENST00000614522 232 ntBASIC14.81□□□□□ -0.04
HLA-DQB2P05538 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQB2P05538 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.8□□□□□ -0.04
HLA-DQB2P05538 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms