Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 AL161932.2-201ENST00000435436 679 ntBASIC15.72■□□□□ 0.11
HLA-DRAP01903 FAM58BP-201ENST00000439056 645 ntBASIC15.72■□□□□ 0.11
HLA-DRAP01903 AC012441.2-201ENST00000444843 739 ntBASIC15.72■□□□□ 0.11
HLA-DRAP01903 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 RBM8B-201ENST00000555532 525 ntBASIC15.72■□□□□ 0.11
HLA-DRAP01903 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 AC005586.2-201ENST00000563946 837 ntBASIC15.72■□□□□ 0.11
HLA-DRAP01903 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 AC104982.3-201ENST00000581995 514 ntBASIC15.72■□□□□ 0.11
HLA-DRAP01903 AC009884.2-201ENST00000603110 324 ntBASIC15.72■□□□□ 0.11
HLA-DRAP01903 MIR6752-201ENST00000618442 71 ntBASIC15.72■□□□□ 0.11
HLA-DRAP01903 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 REXO1L6P-201ENST00000603433 1515 ntBASIC15.72■□□□□ 0.11
HLA-DRAP01903 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRAP01903 AC020910.6-201ENST00000623084 1459 ntBASIC15.71■□□□□ 0.11
HLA-DRAP01903 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRAP01903 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRAP01903 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRAP01903 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 AC064801.2-201ENST00000625052 1303 ntBASIC15.71■□□□□ 0.11
HLA-DRAP01903 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRAP01903 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRAP01903 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRAP01903 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRAP01903 MIR1908-201ENST00000410394 80 ntBASIC15.71■□□□□ 0.11
HLA-DRAP01903 RNMTL1P1-201ENST00000454103 560 ntBASIC15.71■□□□□ 0.11
HLA-DRAP01903 AC021723.1-201ENST00000486306 515 ntBASIC15.71■□□□□ 0.11
HLA-DRAP01903 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 AL160314.3-201ENST00000556041 767 ntBASIC15.71■□□□□ 0.11
HLA-DRAP01903 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRAP01903 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRAP01903 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRAP01903 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRAP01903 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.71■□□□□ 0.11
HLA-DRAP01903 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRAP01903 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DRAP01903 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.71■□□□□ 0.1
HLA-DRAP01903 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
HLA-DRAP01903 HSPA8P5-201ENST00000456928 2069 ntBASIC15.71■□□□□ 0.1
HLA-DRAP01903 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DRAP01903 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
HLA-DRAP01903 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DRAP01903 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.71■□□□□ 0.1
HLA-DRAP01903 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRAP01903 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRAP01903 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DRAP01903 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRAP01903 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DRAP01903 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DRAP01903 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRAP01903 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRAP01903 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DRAP01903 AC018735.1-201ENST00000437208 1502 ntBASIC15.7■□□□□ 0.1
HLA-DRAP01903 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
HLA-DRAP01903 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HLA-DRAP01903 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRAP01903 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRAP01903 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DRAP01903 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HLA-DRAP01903 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.7■□□□□ 0.1
HLA-DRAP01903 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRAP01903 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms