Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
TRBV12-3P01733 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 AC244394.1-201ENST00000435000 1665 ntBASIC11.34□□□□□ -0.59
TRBV12-3P01733 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
TRBV12-3P01733 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC11.34□□□□□ -0.59
TRBV12-3P01733 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC11.34□□□□□ -0.59
TRBV12-3P01733 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC11.34□□□□□ -0.59
TRBV12-3P01733 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 BRWD1P1-201ENST00000401091 371 ntBASIC11.34□□□□□ -0.59
TRBV12-3P01733 MIR1908-201ENST00000410394 80 ntBASIC11.34□□□□□ -0.59
TRBV12-3P01733 AL354877.1-201ENST00000424412 413 ntBASIC11.34□□□□□ -0.59
TRBV12-3P01733 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.34□□□□□ -0.59
TRBV12-3P01733 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC11.34□□□□□ -0.59
TRBV12-3P01733 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC11.34□□□□□ -0.59
TRBV12-3P01733 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
TRBV12-3P01733 AC008825.2-201ENST00000603374 718 ntBASIC11.34□□□□□ -0.59
TRBV12-3P01733 AC091271.1-201ENST00000611877 1162 ntBASIC11.34□□□□□ -0.59
TRBV12-3P01733 ABBA01031663.1-201ENST00000635630 790 ntBASIC11.34□□□□□ -0.59
TRBV12-3P01733 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.34□□□□□ -0.59
TRBV12-3P01733 AC011498.7-201ENST00000624986 2027 ntBASIC11.34□□□□□ -0.59
TRBV12-3P01733 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
TRBV12-3P01733 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.34□□□□□ -0.59
TRBV12-3P01733 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.34□□□□□ -0.59
TRBV12-3P01733 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.34□□□□□ -0.59
TRBV12-3P01733 FAM45BP-202ENST00000592932 1624 ntBASIC11.34□□□□□ -0.59
TRBV12-3P01733 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
TRBV12-3P01733 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRBV12-3P01733 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
TRBV12-3P01733 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
TRBV12-3P01733 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
TRBV12-3P01733 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 APOC3-202ENST00000375345 604 ntTSL 5 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 NDUFAB1P1-201ENST00000404262 460 ntBASIC11.33□□□□□ -0.6
TRBV12-3P01733 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 CD74-212ENST00000524315 584 ntTSL 5 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 AC100827.2-201ENST00000563214 1194 ntBASIC11.33□□□□□ -0.6
TRBV12-3P01733 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 DERL2-202ENST00000570848 657 ntTSL 5 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 PRKN-211ENST00000615065 261 ntTSL 5 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 AL162426.1-201ENST00000624141 743 ntBASIC11.33□□□□□ -0.6
TRBV12-3P01733 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms