Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 HNRNPA1P56-201ENST00000505767 954 ntBASIC15.51■□□□□ 0.07
TIMP1P01033 IGHEP1-201ENST00000521393 651 ntBASIC15.51■□□□□ 0.07
TIMP1P01033 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
TIMP1P01033 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC15.51■□□□□ 0.07
TIMP1P01033 BATF-202ENST00000555504 361 ntTSL 2 BASIC15.51■□□□□ 0.07
TIMP1P01033 AC023968.2-201ENST00000560593 1049 ntBASIC15.51■□□□□ 0.07
TIMP1P01033 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC15.51■□□□□ 0.07
TIMP1P01033 AC005777.1-201ENST00000588332 187 ntBASIC15.51■□□□□ 0.07
TIMP1P01033 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.51■□□□□ 0.07
TIMP1P01033 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC15.51■□□□□ 0.07
TIMP1P01033 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC15.51■□□□□ 0.07
TIMP1P01033 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.51■□□□□ 0.07
TIMP1P01033 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMP1P01033 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TIMP1P01033 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TIMP1P01033 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMP1P01033 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TIMP1P01033 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMP1P01033 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TIMP1P01033 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
TIMP1P01033 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMP1P01033 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TIMP1P01033 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.51■□□□□ 0.07
TIMP1P01033 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC15.51■□□□□ 0.07
TIMP1P01033 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.51■□□□□ 0.07
TIMP1P01033 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
TIMP1P01033 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TIMP1P01033 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.5■□□□□ 0.07
TIMP1P01033 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TIMP1P01033 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.5■□□□□ 0.07
TIMP1P01033 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.5■□□□□ 0.07
TIMP1P01033 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.5■□□□□ 0.07
TIMP1P01033 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TIMP1P01033 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC15.5■□□□□ 0.07
TIMP1P01033 AL080243.1-201ENST00000423293 1060 ntBASIC15.5■□□□□ 0.07
TIMP1P01033 AL161932.2-201ENST00000435436 679 ntBASIC15.5■□□□□ 0.07
TIMP1P01033 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC15.5■□□□□ 0.07
TIMP1P01033 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC15.5■□□□□ 0.07
TIMP1P01033 RN7SL128P-201ENST00000467883 305 ntBASIC15.5■□□□□ 0.07
TIMP1P01033 AC025186.1-201ENST00000478174 870 ntBASIC15.5■□□□□ 0.07
TIMP1P01033 IGHEP2-201ENST00000519308 1256 ntBASIC15.5■□□□□ 0.07
TIMP1P01033 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.5■□□□□ 0.07
TIMP1P01033 HNRNPA1P5-201ENST00000558213 966 ntBASIC15.5■□□□□ 0.07
TIMP1P01033 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC15.5■□□□□ 0.07
TIMP1P01033 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TIMP1P01033 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TIMP1P01033 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.5■□□□□ 0.07
TIMP1P01033 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TIMP1P01033 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TIMP1P01033 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.49■□□□□ 0.07
TIMP1P01033 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TIMP1P01033 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TIMP1P01033 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TIMP1P01033 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TIMP1P01033 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
TIMP1P01033 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TIMP1P01033 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TIMP1P01033 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TIMP1P01033 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TIMP1P01033 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC15.49■□□□□ 0.07
TIMP1P01033 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TIMP1P01033 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TIMP1P01033 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TIMP1P01033 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TIMP1P01033 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TIMP1P01033 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC15.49■□□□□ 0.07
TIMP1P01033 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC15.49■□□□□ 0.07
TIMP1P01033 STK24P1-201ENST00000455035 1291 ntBASIC15.49■□□□□ 0.07
TIMP1P01033 RN7SL147P-201ENST00000487345 298 ntBASIC15.49■□□□□ 0.07
TIMP1P01033 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TIMP1P01033 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC15.49■□□□□ 0.07
TIMP1P01033 AC092612.1-201ENST00000514501 998 ntBASIC15.49■□□□□ 0.07
TIMP1P01033 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC15.49■□□□□ 0.07
TIMP1P01033 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC15.49■□□□□ 0.07
TIMP1P01033 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC15.49■□□□□ 0.07
TIMP1P01033 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC15.49■□□□□ 0.07
TIMP1P01033 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC15.49■□□□□ 0.07
TIMP1P01033 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC15.49■□□□□ 0.07
TIMP1P01033 AC004686.1-201ENST00000605113 538 ntBASIC15.49■□□□□ 0.07
TIMP1P01033 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms