Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HCN1O60741 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.8□□□□□ -0.2
HCN1O60741 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.8□□□□□ -0.2
HCN1O60741 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.8□□□□□ -0.2
HCN1O60741 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.8□□□□□ -0.2
HCN1O60741 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.8□□□□□ -0.2
HCN1O60741 AHCYP2-201ENST00000430630 1300 ntBASIC13.8□□□□□ -0.2
HCN1O60741 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.8□□□□□ -0.2
HCN1O60741 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HCN1O60741 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.8□□□□□ -0.2
HCN1O60741 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HCN1O60741 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.8□□□□□ -0.2
HCN1O60741 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HCN1O60741 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HCN1O60741 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HCN1O60741 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HCN1O60741 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HCN1O60741 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
HCN1O60741 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 TPM3P8-201ENST00000330554 643 ntBASIC13.79□□□□□ -0.2
HCN1O60741 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.79□□□□□ -0.2
HCN1O60741 BRWD1P1-201ENST00000401091 371 ntBASIC13.79□□□□□ -0.2
HCN1O60741 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.79□□□□□ -0.2
HCN1O60741 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.79□□□□□ -0.2
HCN1O60741 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.79□□□□□ -0.2
HCN1O60741 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
HCN1O60741 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.79□□□□□ -0.2
HCN1O60741 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.79□□□□□ -0.2
HCN1O60741 AC078819.1-201ENST00000547454 765 ntBASIC13.79□□□□□ -0.2
HCN1O60741 AC012085.1-201ENST00000548270 765 ntBASIC13.79□□□□□ -0.2
HCN1O60741 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.79□□□□□ -0.2
HCN1O60741 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.79□□□□□ -0.2
HCN1O60741 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.79□□□□□ -0.2
HCN1O60741 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.79□□□□□ -0.2
HCN1O60741 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.79□□□□□ -0.2
HCN1O60741 AC006453.4-201ENST00000636949 1252 ntBASIC13.79□□□□□ -0.2
HCN1O60741 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.79□□□□□ -0.2
HCN1O60741 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HCN1O60741 DMBT1P1-203ENST00000636837 4628 ntBASIC13.79□□□□□ -0.2
HCN1O60741 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HCN1O60741 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HCN1O60741 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
HCN1O60741 AC107918.4-201ENST00000641966 3141 ntBASIC13.79□□□□□ -0.2
HCN1O60741 PTENP1-202ENST00000532280 3996 ntBASIC13.79□□□□□ -0.2
HCN1O60741 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HCN1O60741 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.78□□□□□ -0.2
HCN1O60741 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.78□□□□□ -0.2
HCN1O60741 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
HCN1O60741 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.78□□□□□ -0.2
HCN1O60741 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
HCN1O60741 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.78□□□□□ -0.2
HCN1O60741 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
HCN1O60741 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.78□□□□□ -0.2
HCN1O60741 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HCN1O60741 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms