Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.64■□□□□ 0.09
O00370 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.64■□□□□ 0.09
O00370 AL359881.3-201ENST00000602640 1721 ntBASIC15.64■□□□□ 0.09
O00370 AL008721.1-201ENST00000609964 604 ntBASIC15.64■□□□□ 0.09
O00370 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.64■□□□□ 0.09
O00370 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.64■□□□□ 0.09
O00370 AC244157.2-201ENST00000616239 1006 ntBASIC15.64■□□□□ 0.09
O00370 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.64■□□□□ 0.09
O00370 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
O00370 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
O00370 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
O00370 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
O00370 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.64■□□□□ 0.09
O00370 SBF1P1-201ENST00000444527 5631 ntBASIC15.64■□□□□ 0.09
O00370 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
O00370 AC015818.8-201ENST00000587907 1519 ntBASIC15.63■□□□□ 0.09
O00370 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
O00370 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.63■□□□□ 0.09
O00370 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.63■□□□□ 0.09
O00370 E2F3P2-201ENST00000447755 1422 ntBASIC15.63■□□□□ 0.09
O00370 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
O00370 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.63■□□□□ 0.09
O00370 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.63■□□□□ 0.09
O00370 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
O00370 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
O00370 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
O00370 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.63■□□□□ 0.09
O00370 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 FAM86HP-204ENST00000513466 959 ntBASIC15.63■□□□□ 0.09
O00370 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
O00370 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.63■□□□□ 0.09
O00370 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 AC009955.4-201ENST00000597192 544 ntBASIC15.63■□□□□ 0.09
O00370 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.63■□□□□ 0.09
O00370 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.63■□□□□ 0.09
O00370 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
O00370 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.63■□□□□ 0.09
O00370 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
O00370 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.63■□□□□ 0.09
O00370 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
O00370 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
O00370 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
O00370 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
O00370 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
O00370 AC097376.2-205ENST00000610159 5334 ntBASIC15.62■□□□□ 0.09
O00370 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
O00370 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.62■□□□□ 0.09
O00370 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
O00370 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.62■□□□□ 0.09
O00370 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.62■□□□□ 0.09
O00370 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
O00370 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.62■□□□□ 0.09
O00370 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
O00370 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
O00370 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.62■□□□□ 0.09
O00370 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
O00370 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
O00370 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.62■□□□□ 0.09
O00370 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.62■□□□□ 0.09
O00370 RPS2P32-201ENST00000439199 892 ntBASIC15.62■□□□□ 0.09
O00370 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.62■□□□□ 0.09
O00370 Z93015.1-201ENST00000451718 390 ntBASIC15.62■□□□□ 0.09
O00370 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.62■□□□□ 0.09
O00370 RPL13AP20-201ENST00000459725 609 ntBASIC15.62■□□□□ 0.09
O00370 RPSAP36-202ENST00000494591 1261 ntBASIC15.62■□□□□ 0.09
O00370 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
O00370 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.62■□□□□ 0.09
O00370 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
O00370 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.62■□□□□ 0.09
O00370 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.62■□□□□ 0.09
O00370 DUX4L46-201ENST00000566845 751 ntBASIC15.62■□□□□ 0.09
O00370 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.62■□□□□ 0.09
O00370 RN7SL560P-201ENST00000577943 264 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms