Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.53□□□□□ -0.08
TLR4O00206 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.53□□□□□ -0.08
TLR4O00206 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.53□□□□□ -0.08
TLR4O00206 MIR6727-201ENST00000620702 65 ntBASIC14.53□□□□□ -0.08
TLR4O00206 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.53□□□□□ -0.08
TLR4O00206 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.53□□□□□ -0.08
TLR4O00206 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TLR4O00206 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TLR4O00206 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TLR4O00206 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.53□□□□□ -0.08
TLR4O00206 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TLR4O00206 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.53□□□□□ -0.08
TLR4O00206 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TLR4O00206 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.53□□□□□ -0.08
TLR4O00206 AC005089.1-201ENST00000619486 2241 ntBASIC14.53□□□□□ -0.08
TLR4O00206 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.53□□□□□ -0.08
TLR4O00206 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TLR4O00206 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TLR4O00206 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
TLR4O00206 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TLR4O00206 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TLR4O00206 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
TLR4O00206 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TLR4O00206 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TLR4O00206 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TLR4O00206 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.08
TLR4O00206 TBC1D3J-201ENST00000620719 1426 ntBASIC14.52□□□□□ -0.08
TLR4O00206 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TLR4O00206 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TLR4O00206 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TLR4O00206 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TLR4O00206 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TLR4O00206 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TLR4O00206 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TLR4O00206 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TLR4O00206 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TLR4O00206 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TLR4O00206 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TLR4O00206 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
TLR4O00206 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TLR4O00206 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.52□□□□□ -0.09
TLR4O00206 AL645933.1-201ENST00000440087 609 ntBASIC14.52□□□□□ -0.09
TLR4O00206 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.52□□□□□ -0.09
TLR4O00206 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.52□□□□□ -0.09
TLR4O00206 AC006122.1-201ENST00000493323 440 ntBASIC14.52□□□□□ -0.09
TLR4O00206 AC019193.1-201ENST00000506678 823 ntBASIC14.52□□□□□ -0.09
TLR4O00206 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TLR4O00206 MIR5572-201ENST00000583188 137 ntBASIC14.52□□□□□ -0.09
TLR4O00206 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
TLR4O00206 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.52□□□□□ -0.09
TLR4O00206 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.52□□□□□ -0.09
TLR4O00206 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.52□□□□□ -0.09
TLR4O00206 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TLR4O00206 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TLR4O00206 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.52□□□□□ -0.09
TLR4O00206 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TLR4O00206 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TLR4O00206 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TLR4O00206 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TLR4O00206 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.52□□□□□ -0.09
TLR4O00206 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TLR4O00206 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TLR4O00206 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TLR4O00206 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TLR4O00206 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.52□□□□□ -0.09
TLR4O00206 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TLR4O00206 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TLR4O00206 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.52□□□□□ -0.09
TLR4O00206 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TLR4O00206 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.51□□□□□ -0.09
TLR4O00206 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TLR4O00206 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TLR4O00206 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TLR4O00206 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.51□□□□□ -0.09
TLR4O00206 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TLR4O00206 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TLR4O00206 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.51□□□□□ -0.09
TLR4O00206 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TLR4O00206 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.51□□□□□ -0.09
TLR4O00206 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TLR4O00206 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TLR4O00206 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TLR4O00206 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.51□□□□□ -0.09
TLR4O00206 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TLR4O00206 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.51□□□□□ -0.09
TLR4O00206 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TLR4O00206 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TLR4O00206 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TLR4O00206 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TLR4O00206 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TLR4O00206 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TLR4O00206 AC026316.1-201ENST00000398900 414 ntBASIC14.51□□□□□ -0.09
TLR4O00206 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TLR4O00206 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TLR4O00206 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.51□□□□□ -0.09
TLR4O00206 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.51□□□□□ -0.09
TLR4O00206 AC069218.1-201ENST00000435269 762 ntBASIC14.51□□□□□ -0.09
TLR4O00206 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.51□□□□□ -0.09
TLR4O00206 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.51□□□□□ -0.09
TLR4O00206 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms