Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 KRT8P6-201ENST00000399259 1207 ntBASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 OR2W2P-201ENST00000406313 909 ntBASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 FTH1P18-201ENST00000412071 549 ntBASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 AC026884.1-201ENST00000418296 457 ntBASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 RBPMSLP-201ENST00000433427 502 ntBASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 RNASEH2CP1-201ENST00000454281 502 ntBASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 AC007679.1-201ENST00000458609 502 ntBASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 RNU1-80P-201ENST00000459500 161 ntBASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 TBC1D3P6-201ENST00000505954 962 ntBASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 AL590556.2-202ENST00000636906 844 ntBASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 RPL18AP16-201ENST00000424057 531 ntBASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 CDKN2A-AS1-201ENST00000441769 823 ntBASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 Z82244.2-201ENST00000632196 448 ntBASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88BA6NKF7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM88BA6NKF7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM88BA6NKF7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TMEM88BA6NKF7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TMEM88BA6NKF7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 ZNF877P-201ENST00000437614 612 ntBASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 AL136084.1-201ENST00000449172 318 ntBASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 AP003040.1-201ENST00000532044 1024 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms