Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 BTBD6P1-201ENST00000412176 1267 ntBASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 AL583810.1-201ENST00000553344 1045 ntBASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 AC100827.2-201ENST00000563214 1194 ntBASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 AC009884.2-201ENST00000603110 324 ntBASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 AC009542.2-202ENST00000619004 1067 ntBASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 SBF1P1-201ENST00000444527 5631 ntBASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDGFL3Q9Y3E1 AC097359.2-201ENST00000604992 2389 ntBASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 RN7SL832P-201ENST00000607781 1756 ntBASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 AC012441.2-201ENST00000444843 739 ntBASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 HSPB1P2-201ENST00000448722 546 ntBASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 MIR6720-201ENST00000611664 98 ntBASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms