Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 AL590560.3-201ENST00000623350 461 ntBASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 AC020658.7-201ENST00000624274 2442 ntBASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 USP3-204ENST00000540797 5474 ntTSL 2 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 AGAP10P-201ENST00000454844 2418 ntBASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 RNU1-114P-201ENST00000365297 166 ntBASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 BX842568.4-201ENST00000421222 227 ntBASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 AC009477.1-201ENST00000452936 217 ntBASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 RN7SL399P-201ENST00000471648 279 ntBASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 SPDYE18-201ENST00000510091 1050 ntBASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 SNHG9-202ENST00000564014 471 ntBASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 TUBB8P4-201ENST00000511806 1324 ntBASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms