Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PEG13-201ENST00000631594 5667 ntBASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPA1Q9UND3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPA1Q9UND3 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPA1Q9UND3 KRT8P29-201ENST00000420409 1371 ntBASIC13.58□□□□□ -0.23
NPIPA1Q9UND3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.58□□□□□ -0.23
NPIPA1Q9UND3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPA1Q9UND3 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
NPIPA1Q9UND3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPA1Q9UND3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 AC015656.1-201ENST00000624209 3578 ntBASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 MIR769-201ENST00000390225 118 ntBASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 CYP46A4P-201ENST00000414953 267 ntBASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 AC016700.1-201ENST00000429424 312 ntBASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 RNMTL1P1-201ENST00000454103 560 ntBASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 AC106872.11-201ENST00000605838 421 ntBASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 AL023803.2-201ENST00000620080 638 ntBASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 AC002472.3-201ENST00000640124 621 ntBASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA1Q9UND3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 AC091544.8-201ENST00000619490 361 ntBASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA1Q9UND3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms