Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC007191.1-201ENST00000623179 2995 ntBASIC14.66□□□□□ -0.06
SPASTQ9UBP0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 LILRP1-201ENST00000444199 1370 ntBASIC14.66□□□□□ -0.06
SPASTQ9UBP0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.66□□□□□ -0.06
SPASTQ9UBP0 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 INTS4P1-203ENST00000641008 3683 ntBASIC14.66□□□□□ -0.06
SPASTQ9UBP0 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 AC011840.2-201ENST00000563063 1520 ntBASIC14.66□□□□□ -0.06
SPASTQ9UBP0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 FGD5P1-202ENST00000614866 2498 ntBASIC14.66□□□□□ -0.06
SPASTQ9UBP0 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 AP000845.1-201ENST00000581677 2131 ntBASIC14.65□□□□□ -0.06
SPASTQ9UBP0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 AC011742.3-201ENST00000439053 820 ntBASIC14.65□□□□□ -0.06
SPASTQ9UBP0 RNMTL1P1-201ENST00000454103 560 ntBASIC14.65□□□□□ -0.06
SPASTQ9UBP0 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 RHOQP1-201ENST00000555758 579 ntBASIC14.65□□□□□ -0.06
SPASTQ9UBP0 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 BNIP3P13-201ENST00000599968 566 ntBASIC14.65□□□□□ -0.06
SPASTQ9UBP0 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.65□□□□□ -0.06
SPASTQ9UBP0 AC091544.8-201ENST00000619490 361 ntBASIC14.65□□□□□ -0.06
SPASTQ9UBP0 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 AC022748.3-201ENST00000621828 275 ntBASIC14.65□□□□□ -0.06
SPASTQ9UBP0 AC004923.1-202ENST00000642106 209 ntBASIC14.65□□□□□ -0.06
SPASTQ9UBP0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 SHC1P1-201ENST00000425230 1745 ntBASIC14.65□□□□□ -0.06
SPASTQ9UBP0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 AC232323.1-201ENST00000540724 2099 ntBASIC14.65□□□□□ -0.06
SPASTQ9UBP0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms