Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 PDIA3P2-201ENST00000428073 158 ntBASIC17.03■□□□□ 0.32
SLF1Q9BQI6 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 AL353637.1-201ENST00000451571 732 ntBASIC17.03■□□□□ 0.32
SLF1Q9BQI6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 AL133499.1-201ENST00000596207 608 ntBASIC17.03■□□□□ 0.32
SLF1Q9BQI6 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 CYP4F23P-201ENST00000593402 1579 ntBASIC17.02■□□□□ 0.32
SLF1Q9BQI6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.02■□□□□ 0.32
SLF1Q9BQI6 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.02■□□□□ 0.32
SLF1Q9BQI6 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 RBM8B-201ENST00000555532 525 ntBASIC17.02■□□□□ 0.32
SLF1Q9BQI6 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 AC133540.1-201ENST00000620845 1019 ntBASIC17.02■□□□□ 0.32
SLF1Q9BQI6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.02■□□□□ 0.32
SLF1Q9BQI6 AC005912.2-201ENST00000619492 2400 ntBASIC17.02■□□□□ 0.32
SLF1Q9BQI6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
SLF1Q9BQI6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
SLF1Q9BQI6 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLF1Q9BQI6 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SLF1Q9BQI6 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.02■□□□□ 0.31
SLF1Q9BQI6 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.02■□□□□ 0.31
SLF1Q9BQI6 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.02■□□□□ 0.31
SLF1Q9BQI6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLF1Q9BQI6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLF1Q9BQI6 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SLF1Q9BQI6 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLF1Q9BQI6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLF1Q9BQI6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLF1Q9BQI6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 AC092135.3-201ENST00000624151 1846 ntBASIC17.01■□□□□ 0.31
SLF1Q9BQI6 KRT8P21-201ENST00000430398 1491 ntBASIC17.01■□□□□ 0.31
SLF1Q9BQI6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 MAGEA5-201ENST00000446757 942 ntBASIC17.01■□□□□ 0.31
SLF1Q9BQI6 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.01■□□□□ 0.31
SLF1Q9BQI6 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms