Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 MBLAC2-202ENST00000514906 1936 ntBASIC17.17■□□□□ 0.34
TRIM47Q96LD4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 AC239868.1-201ENST00000369385 493 ntBASIC17.16■□□□□ 0.34
TRIM47Q96LD4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 AP002803.1-201ENST00000528836 498 ntBASIC17.16■□□□□ 0.34
TRIM47Q96LD4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 FGD5P1-202ENST00000614866 2498 ntBASIC17.16■□□□□ 0.34
TRIM47Q96LD4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM47Q96LD4 AL136379.1-201ENST00000623471 2642 ntBASIC17.16■□□□□ 0.34
TRIM47Q96LD4 AC025271.4-201ENST00000621477 1726 ntBASIC17.16■□□□□ 0.34
TRIM47Q96LD4 FAM90A7P-201ENST00000382628 1395 ntBASIC17.15■□□□□ 0.34
TRIM47Q96LD4 FAM90A23P-201ENST00000400136 1395 ntBASIC17.15■□□□□ 0.34
TRIM47Q96LD4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 FAM45BP-202ENST00000592932 1624 ntBASIC17.15■□□□□ 0.34
TRIM47Q96LD4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 AC234644.1-201ENST00000406065 370 ntBASIC17.15■□□□□ 0.34
TRIM47Q96LD4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 AC097065.1-201ENST00000425737 517 ntBASIC17.15■□□□□ 0.34
TRIM47Q96LD4 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 RN7SL67P-201ENST00000492147 296 ntBASIC17.15■□□□□ 0.34
TRIM47Q96LD4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM47Q96LD4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms