Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX11Q96FC9 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX11Q96FC9 FAM8A4P-201ENST00000435433 1213 ntBASIC17.48■□□□□ 0.39
DDX11Q96FC9 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.48■□□□□ 0.39
DDX11Q96FC9 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC17.48■□□□□ 0.39
DDX11Q96FC9 AC005840.4-201ENST00000541242 2494 ntBASIC17.48■□□□□ 0.39
DDX11Q96FC9 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
DDX11Q96FC9 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX11Q96FC9 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX11Q96FC9 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 AL096828.3-201ENST00000615354 462 ntBASIC17.47■□□□□ 0.39
DDX11Q96FC9 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX11Q96FC9 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.47■□□□□ 0.39
DDX11Q96FC9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
DDX11Q96FC9 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
DDX11Q96FC9 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
DDX11Q96FC9 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
DDX11Q96FC9 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
DDX11Q96FC9 SALL4P5-201ENST00000419001 1760 ntBASIC17.46■□□□□ 0.39
DDX11Q96FC9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.46■□□□□ 0.39
DDX11Q96FC9 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
DDX11Q96FC9 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.46■□□□□ 0.39
DDX11Q96FC9 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.46■□□□□ 0.39
DDX11Q96FC9 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.46■□□□□ 0.39
DDX11Q96FC9 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.46■□□□□ 0.39
DDX11Q96FC9 AC004898.1-201ENST00000451057 766 ntBASIC17.46■□□□□ 0.39
DDX11Q96FC9 AC022447.6-201ENST00000515522 438 ntBASIC17.46■□□□□ 0.39
DDX11Q96FC9 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
DDX11Q96FC9 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms