Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC015656.1-201ENST00000624209 3578 ntBASIC13.02□□□□□ -0.32
APH1AQ96BI3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
APH1AQ96BI3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APH1AQ96BI3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
APH1AQ96BI3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APH1AQ96BI3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
APH1AQ96BI3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
APH1AQ96BI3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APH1AQ96BI3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.02□□□□□ -0.32
APH1AQ96BI3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
APH1AQ96BI3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APH1AQ96BI3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APH1AQ96BI3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
APH1AQ96BI3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APH1AQ96BI3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APH1AQ96BI3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APH1AQ96BI3 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 AC012441.2-201ENST00000444843 739 ntBASIC13.02□□□□□ -0.33
APH1AQ96BI3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APH1AQ96BI3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 AC103988.2-201ENST00000561804 725 ntBASIC13.02□□□□□ -0.33
APH1AQ96BI3 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 MIR4538-201ENST00000581377 78 ntBASIC13.02□□□□□ -0.33
APH1AQ96BI3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APH1AQ96BI3 AC243960.2-201ENST00000600996 747 ntBASIC13.02□□□□□ -0.33
APH1AQ96BI3 AL118558.3-201ENST00000607414 1079 ntBASIC13.02□□□□□ -0.33
APH1AQ96BI3 MIR6720-201ENST00000611664 98 ntBASIC13.02□□□□□ -0.33
APH1AQ96BI3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 MIR6869-201ENST00000619434 62 ntBASIC13.02□□□□□ -0.33
APH1AQ96BI3 AL008638.5-201ENST00000623814 1298 ntBASIC13.02□□□□□ -0.33
APH1AQ96BI3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APH1AQ96BI3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APH1AQ96BI3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APH1AQ96BI3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APH1AQ96BI3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APH1AQ96BI3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APH1AQ96BI3 AC009093.10-201ENST00000641956 1442 ntBASIC13.02□□□□□ -0.33
APH1AQ96BI3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APH1AQ96BI3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 AL590440.2-201ENST00000641973 1595 ntBASIC13.02□□□□□ -0.33
APH1AQ96BI3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APH1AQ96BI3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.02□□□□□ -0.33
APH1AQ96BI3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APH1AQ96BI3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.01□□□□□ -0.33
APH1AQ96BI3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 AC022447.6-201ENST00000515522 438 ntBASIC13.01□□□□□ -0.33
APH1AQ96BI3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 AC005730.2-201ENST00000564549 1184 ntBASIC13.01□□□□□ -0.33
APH1AQ96BI3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms