Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.86■□□□□ 0.45
RPGRQ92834 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RPGRQ92834 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.86■□□□□ 0.45
RPGRQ92834 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RPGRQ92834 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RPGRQ92834 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
RPGRQ92834 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 SAT1-201ENST00000379251 801 ntTSL 2 BASIC17.85■□□□□ 0.45
RPGRQ92834 SAT1-202ENST00000379253 909 ntTSL 2 BASIC17.85■□□□□ 0.45
RPGRQ92834 SAT1-203ENST00000379254 868 ntTSL 3 BASIC17.85■□□□□ 0.45
RPGRQ92834 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.85■□□□□ 0.45
RPGRQ92834 BCAS2P2-201ENST00000425064 674 ntBASIC17.85■□□□□ 0.45
RPGRQ92834 AC018638.5-201ENST00000450885 754 ntBASIC17.85■□□□□ 0.45
RPGRQ92834 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.85■□□□□ 0.45
RPGRQ92834 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.85■□□□□ 0.45
RPGRQ92834 RN7SL357P-201ENST00000581065 298 ntBASIC17.85■□□□□ 0.45
RPGRQ92834 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.85■□□□□ 0.45
RPGRQ92834 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPGRQ92834 AC007250.1-201ENST00000608934 338 ntBASIC17.85■□□□□ 0.45
RPGRQ92834 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.85■□□□□ 0.45
RPGRQ92834 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC17.85■□□□□ 0.45
RPGRQ92834 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.85■□□□□ 0.45
RPGRQ92834 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RPGRQ92834 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
RPGRQ92834 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.84■□□□□ 0.45
RPGRQ92834 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RPGRQ92834 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RPGRQ92834 PYY2-201ENST00000315776 282 ntBASIC17.84■□□□□ 0.45
RPGRQ92834 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RPGRQ92834 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.84■□□□□ 0.45
RPGRQ92834 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC17.84■□□□□ 0.45
RPGRQ92834 AC098934.1-203ENST00000442868 1262 ntBASIC17.84■□□□□ 0.45
RPGRQ92834 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC17.84■□□□□ 0.45
RPGRQ92834 AC010234.1-201ENST00000494599 870 ntBASIC17.84■□□□□ 0.45
RPGRQ92834 AC026410.1-201ENST00000507366 1101 ntBASIC17.84■□□□□ 0.45
RPGRQ92834 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC17.84■□□□□ 0.45
RPGRQ92834 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.84■□□□□ 0.45
RPGRQ92834 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RPGRQ92834 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC17.84■□□□□ 0.45
RPGRQ92834 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
RPGRQ92834 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 AC006158.1-201ENST00000610661 249 ntBASIC17.84■□□□□ 0.45
RPGRQ92834 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.84■□□□□ 0.45
RPGRQ92834 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 AGGF1P1-201ENST00000509500 2073 ntBASIC17.84■□□□□ 0.45
RPGRQ92834 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RPGRQ92834 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RPGRQ92834 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RPGRQ92834 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RPGRQ92834 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RPGRQ92834 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPGRQ92834 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC17.83■□□□□ 0.45
RPGRQ92834 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.83■□□□□ 0.45
RPGRQ92834 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPGRQ92834 AC008741.2-201ENST00000612792 3115 ntBASIC17.83■□□□□ 0.45
RPGRQ92834 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RPGRQ92834 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms