Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 PIN1P1-201ENST00000412108 996 ntBASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 AC092552.1-201ENST00000547243 906 ntBASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 AC007431.3-201ENST00000623221 587 ntBASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 AC093525.8-201ENST00000624099 1342 ntBASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 PPT1-213ENST00000641319 2388 ntBASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 AC020910.6-201ENST00000623084 1459 ntBASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 AL645937.2-201ENST00000396808 931 ntBASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 C1QBPP1-201ENST00000400117 770 ntBASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 MYCLP2-201ENST00000449268 967 ntBASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 API5-211ENST00000534695 560 ntTSL 5 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 CHCHD2P3-201ENST00000603038 451 ntBASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 TMEM261P1-201ENST00000604899 340 ntBASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms