Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 OR52V1P-201ENST00000515557 898 ntBASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 BOLA3P2-201ENST00000586496 323 ntBASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 MARK2P17-201ENST00000498560 841 ntBASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 RNASEH2CP1-201ENST00000454281 502 ntBASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 AL450346.2-201ENST00000495602 1024 ntBASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 AC139100.2-201ENST00000616901 662 ntBASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 AC232323.1-201ENST00000540724 2099 ntBASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 AL136379.1-201ENST00000623471 2642 ntBASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 KRT18P44-201ENST00000416086 1285 ntBASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 AC011431.1-201ENST00000512971 230 ntBASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 AC004801.1-201ENST00000549557 360 ntBASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 AC026120.2-201ENST00000617239 309 ntBASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 AC005586.2-201ENST00000563946 837 ntBASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC9.49□□□□□ -0.89
ALMS1Q8TCU4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 AL031590.1-202ENST00000641466 1737 ntBASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms