Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 KLF2P1-201ENST00000447438 1042 ntBASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 AL162426.1-201ENST00000624141 743 ntBASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 AC092723.2-201ENST00000624955 793 ntBASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 OR2I1P-209ENST00000641730 5365 ntBASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 AC012617.1-204ENST00000586340 2305 ntBASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SCUBE3Q8IX30 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 AC011498.7-201ENST00000624986 2027 ntBASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 AL591846.1-201ENST00000451736 433 ntBASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 AC100827.2-201ENST00000563214 1194 ntBASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 AC005730.2-201ENST00000564549 1184 ntBASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 RN7SL440P-201ENST00000577855 343 ntBASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 AC104982.3-201ENST00000581995 514 ntBASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 AC091271.1-201ENST00000611877 1162 ntBASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms