Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AP001527.2-201ENST00000614441 631 ntBASIC15.6■□□□□ 0.09
RNF135Q8IUD6 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF135Q8IUD6 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF135Q8IUD6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF135Q8IUD6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF135Q8IUD6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF135Q8IUD6 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RNF135Q8IUD6 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF135Q8IUD6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF135Q8IUD6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF135Q8IUD6 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF135Q8IUD6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF135Q8IUD6 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF135Q8IUD6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF135Q8IUD6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RNF135Q8IUD6 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.59■□□□□ 0.09
RNF135Q8IUD6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 OR2K2-202ENST00000374428 1038 ntBASIC15.59■□□□□ 0.09
RNF135Q8IUD6 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 RN7SL67P-201ENST00000492147 296 ntBASIC15.59■□□□□ 0.09
RNF135Q8IUD6 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF135Q8IUD6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RNF135Q8IUD6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RNF135Q8IUD6 AL157414.3-201ENST00000624276 1954 ntBASIC15.58■□□□□ 0.09
RNF135Q8IUD6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
RNF135Q8IUD6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
RNF135Q8IUD6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RNF135Q8IUD6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RNF135Q8IUD6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.09
RNF135Q8IUD6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RNF135Q8IUD6 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 RN7SL258P-201ENST00000478664 300 ntBASIC15.58■□□□□ 0.08
RNF135Q8IUD6 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 AL022344.2-201ENST00000568976 968 ntBASIC15.58■□□□□ 0.08
RNF135Q8IUD6 SAMD11P1-201ENST00000571429 661 ntBASIC15.58■□□□□ 0.08
RNF135Q8IUD6 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 AL358472.3-201ENST00000608147 415 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms