Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 OR2K2-202ENST00000374428 1038 ntBASIC16.32■□□□□ 0.2
TRIM50Q86XT4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 FXNP2-201ENST00000411625 547 ntBASIC16.32■□□□□ 0.2
TRIM50Q86XT4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 OR2R1P-201ENST00000441404 914 ntBASIC16.32■□□□□ 0.2
TRIM50Q86XT4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 AC015909.3-201ENST00000572855 1794 ntBASIC16.32■□□□□ 0.2
TRIM50Q86XT4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.32■□□□□ 0.2
TRIM50Q86XT4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 AC006453.1-201ENST00000636037 1257 ntBASIC16.32■□□□□ 0.2
TRIM50Q86XT4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM50Q86XT4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 TBC1D3J-201ENST00000620719 1426 ntBASIC16.31■□□□□ 0.2
TRIM50Q86XT4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 XBP1P1-201ENST00000436573 652 ntBASIC16.31■□□□□ 0.2
TRIM50Q86XT4 TMEM198B-204ENST00000484016 896 ntBASIC16.31■□□□□ 0.2
TRIM50Q86XT4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 AC128714.1-201ENST00000637035 887 ntBASIC16.31■□□□□ 0.2
TRIM50Q86XT4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM50Q86XT4 AC015688.4-201ENST00000580780 1647 ntBASIC16.3■□□□□ 0.2
TRIM50Q86XT4 AL365209.1-201ENST00000624418 6473 ntBASIC16.3■□□□□ 0.2
TRIM50Q86XT4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms