Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 AC007952.5-201ENST00000572818 1486 ntBASIC18.05■□□□□ 0.48
RC3H1Q5TC82 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.05■□□□□ 0.48
RC3H1Q5TC82 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 AL109954.1-202ENST00000564051 2148 ntBASIC18.04■□□□□ 0.48
RC3H1Q5TC82 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.04■□□□□ 0.48
RC3H1Q5TC82 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 AC004554.1-201ENST00000422830 1468 ntBASIC18.04■□□□□ 0.48
RC3H1Q5TC82 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 STK24P1-201ENST00000455035 1291 ntBASIC18.04■□□□□ 0.48
RC3H1Q5TC82 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 BATF-202ENST00000555504 361 ntTSL 2 BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 AC027139.1-201ENST00000565286 951 ntBASIC18.04■□□□□ 0.48
RC3H1Q5TC82 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 AL160191.2-201ENST00000603975 601 ntBASIC18.04■□□□□ 0.48
RC3H1Q5TC82 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RC3H1Q5TC82 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 AL354702.1-201ENST00000442006 1960 ntBASIC18.03■□□□□ 0.48
RC3H1Q5TC82 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 PTGER4P2-201ENST00000328411 252 ntBASIC18.03■□□□□ 0.48
RC3H1Q5TC82 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 KRT18P4-201ENST00000422599 1288 ntBASIC18.03■□□□□ 0.48
RC3H1Q5TC82 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 PTGER4P3-201ENST00000458150 252 ntBASIC18.03■□□□□ 0.48
RC3H1Q5TC82 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 RN7SKP155-201ENST00000516031 288 ntBASIC18.03■□□□□ 0.48
RC3H1Q5TC82 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 F11R-204ENST00000537746 1245 ntTSL 2 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC18.03■□□□□ 0.48
RC3H1Q5TC82 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC18.03■□□□□ 0.48
RC3H1Q5TC82 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 AMT-256ENST00000638063 1783 ntTSL 5 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms