Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 AC012618.1-201ENST00000461223 412 ntBASIC20.07■□□□□ 0.8
CDCA8Q53HL2 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 AP001267.2-201ENST00000532619 2086 ntBASIC20.07■□□□□ 0.8
CDCA8Q53HL2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA8Q53HL2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 FES-203ENST00000394302 2133 ntTSL 5 BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 INTS4P1-203ENST00000641008 3683 ntBASIC20.06■□□□□ 0.8
CDCA8Q53HL2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 FRMPD2B-201ENST00000431305 1347 ntBASIC20.06■□□□□ 0.8
CDCA8Q53HL2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 RHEB-207ENST00000496004 744 ntTSL 2 BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 AC245884.6-201ENST00000515672 1067 ntBASIC20.06■□□□□ 0.8
CDCA8Q53HL2 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 AP002353.1-201ENST00000528257 1599 ntBASIC20.06■□□□□ 0.8
CDCA8Q53HL2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 AP002414.2-201ENST00000591780 3365 ntBASIC20.06■□□□□ 0.8
CDCA8Q53HL2 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA8Q53HL2 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 AC092580.1-201ENST00000433998 658 ntBASIC20.05■□□□□ 0.8
CDCA8Q53HL2 SUPT4H1P2-201ENST00000501248 353 ntBASIC20.05■□□□□ 0.8
CDCA8Q53HL2 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 AC011498.7-201ENST00000624986 2027 ntBASIC20.05■□□□□ 0.8
CDCA8Q53HL2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA8Q53HL2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms