Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PRKDCP78527 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PRKDCP78527 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PRKDCP78527 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
PRKDCP78527 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PRKDCP78527 AC010086.2-201ENST00000428616 226 ntBASIC10.12□□□□□ -0.79
PRKDCP78527 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC10.12□□□□□ -0.79
PRKDCP78527 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC10.12□□□□□ -0.79
PRKDCP78527 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC10.12□□□□□ -0.79
PRKDCP78527 PCTP-206ENST00000573500 919 ntTSL 3 BASIC10.12□□□□□ -0.79
PRKDCP78527 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC10.12□□□□□ -0.79
PRKDCP78527 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC10.12□□□□□ -0.79
PRKDCP78527 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PRKDCP78527 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC10.12□□□□□ -0.79
PRKDCP78527 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PRKDCP78527 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
PRKDCP78527 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC10.12□□□□□ -0.79
PRKDCP78527 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC10.12□□□□□ -0.79
PRKDCP78527 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PRKDCP78527 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC10.12□□□□□ -0.79
PRKDCP78527 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PRKDCP78527 CCT8L1P-201ENST00000465400 1674 ntBASIC10.12□□□□□ -0.79
PRKDCP78527 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC10.12□□□□□ -0.79
PRKDCP78527 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC10.12□□□□□ -0.79
PRKDCP78527 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
PRKDCP78527 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PRKDCP78527 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC10.12□□□□□ -0.79
PRKDCP78527 MIR766-201ENST00000390223 111 ntBASIC10.12□□□□□ -0.79
PRKDCP78527 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
PRKDCP78527 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC10.12□□□□□ -0.79
PRKDCP78527 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC10.12□□□□□ -0.79
PRKDCP78527 AP001979.1-201ENST00000529222 751 ntBASIC10.12□□□□□ -0.79
PRKDCP78527 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PRKDCP78527 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PRKDCP78527 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC10.12□□□□□ -0.79
PRKDCP78527 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC10.12□□□□□ -0.79
PRKDCP78527 AL078624.1-201ENST00000604004 547 ntBASIC10.12□□□□□ -0.79
PRKDCP78527 AL121992.3-201ENST00000606186 346 ntBASIC10.12□□□□□ -0.79
PRKDCP78527 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC10.12□□□□□ -0.79
PRKDCP78527 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
PRKDCP78527 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC10.12□□□□□ -0.79
PRKDCP78527 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PRKDCP78527 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC10.12□□□□□ -0.79
PRKDCP78527 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
PRKDCP78527 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
PRKDCP78527 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC10.11□□□□□ -0.79
PRKDCP78527 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC10.11□□□□□ -0.79
PRKDCP78527 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC10.11□□□□□ -0.79
PRKDCP78527 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC10.11□□□□□ -0.79
PRKDCP78527 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 ACP1-207ENST00000439645 605 ntTSL 2 BASIC10.11□□□□□ -0.79
PRKDCP78527 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC10.11□□□□□ -0.79
PRKDCP78527 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC10.11□□□□□ -0.79
PRKDCP78527 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC10.11□□□□□ -0.79
PRKDCP78527 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC10.11□□□□□ -0.79
PRKDCP78527 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC10.11□□□□□ -0.79
PRKDCP78527 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC10.11□□□□□ -0.79
PRKDCP78527 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC10.11□□□□□ -0.79
PRKDCP78527 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC10.11□□□□□ -0.79
PRKDCP78527 ACTBP14-201ENST00000411655 1089 ntBASIC10.11□□□□□ -0.79
PRKDCP78527 AP001331.1-201ENST00000413008 1015 ntBASIC10.11□□□□□ -0.79
PRKDCP78527 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC10.11□□□□□ -0.79
PRKDCP78527 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC10.11□□□□□ -0.79
PRKDCP78527 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC10.11□□□□□ -0.79
PRKDCP78527 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
PRKDCP78527 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC10.11□□□□□ -0.79
PRKDCP78527 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC10.11□□□□□ -0.79
PRKDCP78527 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
PRKDCP78527 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC10.11□□□□□ -0.79
PRKDCP78527 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC10.11□□□□□ -0.79
PRKDCP78527 AC069421.1-201ENST00000447462 323 ntBASIC10.11□□□□□ -0.79
PRKDCP78527 PHBP18-201ENST00000546648 813 ntBASIC10.11□□□□□ -0.79
PRKDCP78527 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC10.11□□□□□ -0.79
PRKDCP78527 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC10.11□□□□□ -0.79
PRKDCP78527 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PRKDCP78527 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms