Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TPM4P67936 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TPM4P67936 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
TPM4P67936 MRPL37P1-201ENST00000592451 1337 ntBASIC16.52■□□□□ 0.24
TPM4P67936 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.52■□□□□ 0.24
TPM4P67936 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TPM4P67936 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
TPM4P67936 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TPM4P67936 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TPM4P67936 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TPM4P67936 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TPM4P67936 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TPM4P67936 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TPM4P67936 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.52■□□□□ 0.24
TPM4P67936 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.52■□□□□ 0.24
TPM4P67936 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.52■□□□□ 0.24
TPM4P67936 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.52■□□□□ 0.24
TPM4P67936 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.52■□□□□ 0.24
TPM4P67936 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.52■□□□□ 0.24
TPM4P67936 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.52■□□□□ 0.24
TPM4P67936 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.52■□□□□ 0.24
TPM4P67936 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.52■□□□□ 0.24
TPM4P67936 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.52■□□□□ 0.24
TPM4P67936 AC010327.4-202ENST00000591484 748 ntBASIC16.52■□□□□ 0.24
TPM4P67936 AL121894.2-201ENST00000602977 491 ntBASIC16.52■□□□□ 0.24
TPM4P67936 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.52■□□□□ 0.24
TPM4P67936 PRSS30P-206ENST00000641773 873 ntBASIC16.52■□□□□ 0.24
TPM4P67936 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
TPM4P67936 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC16.52■□□□□ 0.24
TPM4P67936 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.52■□□□□ 0.24
TPM4P67936 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC16.52■□□□□ 0.24
TPM4P67936 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.52■□□□□ 0.23
TPM4P67936 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TPM4P67936 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
TPM4P67936 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.52■□□□□ 0.23
TPM4P67936 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.52■□□□□ 0.23
TPM4P67936 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TPM4P67936 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TPM4P67936 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM4P67936 CICP16-201ENST00000502609 2813 ntBASIC16.51■□□□□ 0.23
TPM4P67936 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.51■□□□□ 0.23
TPM4P67936 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TPM4P67936 PPT1-213ENST00000641319 2388 ntBASIC16.51■□□□□ 0.23
TPM4P67936 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TPM4P67936 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC16.51■□□□□ 0.23
TPM4P67936 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.51■□□□□ 0.23
TPM4P67936 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM4P67936 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM4P67936 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM4P67936 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM4P67936 BTBD7P1-201ENST00000447253 1453 ntBASIC16.51■□□□□ 0.23
TPM4P67936 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
TPM4P67936 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TPM4P67936 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM4P67936 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM4P67936 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.51■□□□□ 0.23
TPM4P67936 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM4P67936 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.51■□□□□ 0.23
TPM4P67936 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TPM4P67936 CNN2P11-201ENST00000429351 262 ntBASIC16.51■□□□□ 0.23
TPM4P67936 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.51■□□□□ 0.23
TPM4P67936 AC112482.1-201ENST00000492080 688 ntBASIC16.51■□□□□ 0.23
TPM4P67936 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TPM4P67936 AL844908.2-201ENST00000609461 460 ntBASIC16.51■□□□□ 0.23
TPM4P67936 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.51■□□□□ 0.23
TPM4P67936 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM4P67936 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM4P67936 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM4P67936 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC16.51■□□□□ 0.23
TPM4P67936 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TPM4P67936 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TPM4P67936 AC005562.1-201ENST00000583030 3219 ntBASIC16.51■□□□□ 0.23
TPM4P67936 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TPM4P67936 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TPM4P67936 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TPM4P67936 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM4P67936 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.5■□□□□ 0.23
TPM4P67936 KLF2P3-201ENST00000451977 1087 ntBASIC16.5■□□□□ 0.23
TPM4P67936 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.5■□□□□ 0.23
TPM4P67936 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TPM4P67936 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM4P67936 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM4P67936 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.5■□□□□ 0.23
TPM4P67936 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms