Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC15.25■□□□□ 0.03
ERVFC1P60507 DNM1P51-201ENST00000558149 522 ntBASIC15.25■□□□□ 0.03
ERVFC1P60507 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ERVFC1P60507 AC140658.4-201ENST00000561990 352 ntBASIC15.25■□□□□ 0.03
ERVFC1P60507 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.25■□□□□ 0.03
ERVFC1P60507 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.25■□□□□ 0.03
ERVFC1P60507 AC011471.3-201ENST00000623576 402 ntBASIC15.25■□□□□ 0.03
ERVFC1P60507 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.25■□□□□ 0.03
ERVFC1P60507 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
ERVFC1P60507 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ERVFC1P60507 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERVFC1P60507 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ERVFC1P60507 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERVFC1P60507 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.25■□□□□ 0.03
ERVFC1P60507 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERVFC1P60507 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ERVFC1P60507 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.25■□□□□ 0.03
ERVFC1P60507 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ERVFC1P60507 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ERVFC1P60507 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERVFC1P60507 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ERVFC1P60507 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERVFC1P60507 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERVFC1P60507 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.24■□□□□ 0.03
ERVFC1P60507 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
ERVFC1P60507 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.24■□□□□ 0.03
ERVFC1P60507 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ERVFC1P60507 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.24■□□□□ 0.03
ERVFC1P60507 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
ERVFC1P60507 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.24■□□□□ 0.03
ERVFC1P60507 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.24■□□□□ 0.03
ERVFC1P60507 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.24■□□□□ 0.03
ERVFC1P60507 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.24■□□□□ 0.03
ERVFC1P60507 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ERVFC1P60507 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.24■□□□□ 0.03
ERVFC1P60507 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.24■□□□□ 0.03
ERVFC1P60507 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.24■□□□□ 0.03
ERVFC1P60507 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ERVFC1P60507 PPIA-208ENST00000489459 907 ntTSL 2 BASIC15.24■□□□□ 0.03
ERVFC1P60507 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.24■□□□□ 0.03
ERVFC1P60507 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC15.24■□□□□ 0.03
ERVFC1P60507 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.24■□□□□ 0.03
ERVFC1P60507 RN7SL596P-201ENST00000582123 288 ntBASIC15.24■□□□□ 0.03
ERVFC1P60507 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC15.24■□□□□ 0.03
ERVFC1P60507 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.24■□□□□ 0.03
ERVFC1P60507 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.24■□□□□ 0.03
ERVFC1P60507 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.24■□□□□ 0.03
ERVFC1P60507 NAMA-206ENST00000605377 509 ntTSL 5 BASIC15.24■□□□□ 0.03
ERVFC1P60507 AC021016.3-201ENST00000608367 477 ntBASIC15.24■□□□□ 0.03
ERVFC1P60507 PPIA-210ENST00000620047 827 ntTSL 5 BASIC15.24■□□□□ 0.03
ERVFC1P60507 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ERVFC1P60507 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ERVFC1P60507 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.24■□□□□ 0.03
ERVFC1P60507 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ERVFC1P60507 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.24■□□□□ 0.03
ERVFC1P60507 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
ERVFC1P60507 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ERVFC1P60507 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.24■□□□□ 0.03
ERVFC1P60507 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.24■□□□□ 0.03
ERVFC1P60507 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.24■□□□□ 0.03
ERVFC1P60507 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERVFC1P60507 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.23■□□□□ 0.03
ERVFC1P60507 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ERVFC1P60507 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERVFC1P60507 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERVFC1P60507 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERVFC1P60507 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ERVFC1P60507 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ERVFC1P60507 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ERVFC1P60507 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ERVFC1P60507 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERVFC1P60507 TSPY26P-202ENST00000565928 3884 ntBASIC15.23■□□□□ 0.03
ERVFC1P60507 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.23■□□□□ 0.03
ERVFC1P60507 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ERVFC1P60507 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ERVFC1P60507 SCARNA12-201ENST00000459155 270 ntBASIC15.23■□□□□ 0.03
ERVFC1P60507 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC15.23■□□□□ 0.03
ERVFC1P60507 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.23■□□□□ 0.03
ERVFC1P60507 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC15.23■□□□□ 0.03
ERVFC1P60507 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.23■□□□□ 0.03
ERVFC1P60507 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.23■□□□□ 0.03
ERVFC1P60507 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms