Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
CMC4P56277 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CMC4P56277 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
CMC4P56277 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 AL390755.1-201ENST00000623716 2027 ntBASIC10.92□□□□□ -0.66
CMC4P56277 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC10.92□□□□□ -0.66
CMC4P56277 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC10.92□□□□□ -0.66
CMC4P56277 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC10.92□□□□□ -0.66
CMC4P56277 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CMC4P56277 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC10.92□□□□□ -0.66
CMC4P56277 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 AHCYP4-201ENST00000419201 1315 ntBASIC10.92□□□□□ -0.66
CMC4P56277 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC10.92□□□□□ -0.66
CMC4P56277 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
CMC4P56277 CICP14-201ENST00000629111 2732 ntBASIC10.92□□□□□ -0.66
CMC4P56277 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CMC4P56277 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
CMC4P56277 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
CMC4P56277 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC10.92□□□□□ -0.66
CMC4P56277 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC10.92□□□□□ -0.66
CMC4P56277 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 AC004898.1-201ENST00000451057 766 ntBASIC10.92□□□□□ -0.66
CMC4P56277 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
CMC4P56277 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC10.92□□□□□ -0.66
CMC4P56277 AC005740.2-201ENST00000511085 419 ntBASIC10.92□□□□□ -0.66
CMC4P56277 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC10.92□□□□□ -0.66
CMC4P56277 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC10.92□□□□□ -0.66
CMC4P56277 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC10.92□□□□□ -0.66
CMC4P56277 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC10.92□□□□□ -0.66
CMC4P56277 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC10.92□□□□□ -0.66
CMC4P56277 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC10.92□□□□□ -0.66
CMC4P56277 AC140658.4-201ENST00000561990 352 ntBASIC10.92□□□□□ -0.66
CMC4P56277 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC10.92□□□□□ -0.66
CMC4P56277 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC10.92□□□□□ -0.66
CMC4P56277 AC009093.2-202ENST00000620513 2079 ntBASIC10.92□□□□□ -0.66
CMC4P56277 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC10.92□□□□□ -0.66
CMC4P56277 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CMC4P56277 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
CMC4P56277 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC10.92□□□□□ -0.66
CMC4P56277 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC10.92□□□□□ -0.66
CMC4P56277 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC10.92□□□□□ -0.66
CMC4P56277 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC10.92□□□□□ -0.66
CMC4P56277 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 AC113367.3-201ENST00000508316 1912 ntBASIC10.92□□□□□ -0.66
CMC4P56277 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CMC4P56277 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC10.92□□□□□ -0.66
CMC4P56277 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CMC4P56277 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CMC4P56277 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC10.91□□□□□ -0.66
CMC4P56277 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC10.91□□□□□ -0.66
CMC4P56277 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC10.91□□□□□ -0.66
CMC4P56277 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC10.91□□□□□ -0.66
CMC4P56277 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CMC4P56277 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 AC018529.2-202ENST00000611482 3087 ntBASIC10.91□□□□□ -0.66
CMC4P56277 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CMC4P56277 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms