Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.82□□□□□ -0.36
FOXG1P55316 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.82□□□□□ -0.36
FOXG1P55316 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.82□□□□□ -0.36
FOXG1P55316 ACTG1P17-201ENST00000558391 1119 ntBASIC12.82□□□□□ -0.36
FOXG1P55316 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.82□□□□□ -0.36
FOXG1P55316 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.82□□□□□ -0.36
FOXG1P55316 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.82□□□□□ -0.36
FOXG1P55316 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.82□□□□□ -0.36
FOXG1P55316 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.82□□□□□ -0.36
FOXG1P55316 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
FOXG1P55316 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
FOXG1P55316 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.82□□□□□ -0.36
FOXG1P55316 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.82□□□□□ -0.36
FOXG1P55316 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
FOXG1P55316 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.82□□□□□ -0.36
FOXG1P55316 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
FOXG1P55316 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.82□□□□□ -0.36
FOXG1P55316 BX640514.1-201ENST00000583223 1918 ntBASIC12.82□□□□□ -0.36
FOXG1P55316 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
FOXG1P55316 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
FOXG1P55316 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.81□□□□□ -0.36
FOXG1P55316 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.81□□□□□ -0.36
FOXG1P55316 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.81□□□□□ -0.36
FOXG1P55316 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.81□□□□□ -0.36
FOXG1P55316 AC015802.1-201ENST00000588104 1449 ntBASIC12.81□□□□□ -0.36
FOXG1P55316 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
FOXG1P55316 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.81□□□□□ -0.36
FOXG1P55316 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.81□□□□□ -0.36
FOXG1P55316 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
FOXG1P55316 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.81□□□□□ -0.36
FOXG1P55316 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.81□□□□□ -0.36
FOXG1P55316 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.81□□□□□ -0.36
FOXG1P55316 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
FOXG1P55316 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.81□□□□□ -0.36
FOXG1P55316 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.81□□□□□ -0.36
FOXG1P55316 BX284668.4-201ENST00000453917 508 ntBASIC12.81□□□□□ -0.36
FOXG1P55316 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.81□□□□□ -0.36
FOXG1P55316 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.81□□□□□ -0.36
FOXG1P55316 AC106794.1-201ENST00000506935 792 ntBASIC12.81□□□□□ -0.36
FOXG1P55316 AC022217.1-201ENST00000521069 738 ntBASIC12.81□□□□□ -0.36
FOXG1P55316 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.81□□□□□ -0.36
FOXG1P55316 SORD2P-201ENST00000558556 1069 ntBASIC12.81□□□□□ -0.36
FOXG1P55316 AC027237.1-201ENST00000560942 655 ntBASIC12.81□□□□□ -0.36
FOXG1P55316 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.81□□□□□ -0.36
FOXG1P55316 AC020914.3-201ENST00000594712 304 ntBASIC12.81□□□□□ -0.36
FOXG1P55316 AL645939.5-201ENST00000606834 243 ntBASIC12.81□□□□□ -0.36
FOXG1P55316 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 AC092299.1-201ENST00000632679 757 ntBASIC12.81□□□□□ -0.36
FOXG1P55316 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
FOXG1P55316 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
FOXG1P55316 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
FOXG1P55316 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.81□□□□□ -0.36
FOXG1P55316 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
FOXG1P55316 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 RN7SL832P-201ENST00000607781 1756 ntBASIC12.81□□□□□ -0.36
FOXG1P55316 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.81□□□□□ -0.36
FOXG1P55316 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
FOXG1P55316 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
FOXG1P55316 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXG1P55316 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms