Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH4P55283 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDH4P55283 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH4P55283 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH4P55283 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH4P55283 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH4P55283 KRT18P36-201ENST00000411618 1276 ntBASIC14.94□□□□□ -0.02
CDH4P55283 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.94□□□□□ -0.02
CDH4P55283 XBP1P1-201ENST00000436573 652 ntBASIC14.94□□□□□ -0.02
CDH4P55283 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH4P55283 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.94□□□□□ -0.02
CDH4P55283 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH4P55283 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH4P55283 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH4P55283 AC003686.1-201ENST00000550956 1034 ntBASIC14.94□□□□□ -0.02
CDH4P55283 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH4P55283 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.94□□□□□ -0.02
CDH4P55283 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH4P55283 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH4P55283 NDUFV2P1-201ENST00000596415 907 ntBASIC14.94□□□□□ -0.02
CDH4P55283 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH4P55283 AC100757.4-201ENST00000626934 759 ntBASIC14.94□□□□□ -0.02
CDH4P55283 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH4P55283 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH4P55283 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH4P55283 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH4P55283 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH4P55283 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH4P55283 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH4P55283 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH4P55283 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH4P55283 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH4P55283 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH4P55283 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH4P55283 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDH4P55283 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH4P55283 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDH4P55283 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CDH4P55283 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDH4P55283 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CDH4P55283 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH4P55283 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDH4P55283 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
CDH4P55283 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CDH4P55283 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 AL161932.2-201ENST00000435436 679 ntBASIC14.93□□□□□ -0.02
CDH4P55283 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.93□□□□□ -0.02
CDH4P55283 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH4P55283 RCC2P8-201ENST00000502779 1035 ntBASIC14.93□□□□□ -0.02
CDH4P55283 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH4P55283 AC124068.2-201ENST00000569473 1109 ntBASIC14.93□□□□□ -0.02
CDH4P55283 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH4P55283 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CDH4P55283 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH4P55283 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH4P55283 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.93□□□□□ -0.02
CDH4P55283 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.93□□□□□ -0.02
CDH4P55283 AL805961.1-203ENST00000641078 1258 ntBASIC14.93□□□□□ -0.02
CDH4P55283 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 AC090505.1-201ENST00000430515 1834 ntBASIC14.93□□□□□ -0.02
CDH4P55283 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH4P55283 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 RN7SL832P-201ENST00000607781 1756 ntBASIC14.93□□□□□ -0.02
CDH4P55283 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH4P55283 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CDH4P55283 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH4P55283 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH4P55283 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDH4P55283 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH4P55283 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH4P55283 AC018629.1-201ENST00000623381 1736 ntBASIC14.92□□□□□ -0.02
CDH4P55283 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDH4P55283 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDH4P55283 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH4P55283 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH4P55283 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH4P55283 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH4P55283 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.92□□□□□ -0.02
CDH4P55283 RN7SKP214-201ENST00000364208 315 ntBASIC14.92□□□□□ -0.02
CDH4P55283 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH4P55283 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms