Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ZNF140P52738 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
ZNF140P52738 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF140P52738 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF140P52738 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF140P52738 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ZNF140P52738 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ZNF140P52738 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 TUBB1P2-201ENST00000422712 1306 ntBASIC14.53□□□□□ -0.08
ZNF140P52738 TUBB1P1-201ENST00000503144 1300 ntBASIC14.53□□□□□ -0.08
ZNF140P52738 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF140P52738 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF140P52738 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 ST13P19-201ENST00000442505 1124 ntBASIC14.53□□□□□ -0.08
ZNF140P52738 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF140P52738 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF140P52738 AC006122.1-201ENST00000493323 440 ntBASIC14.53□□□□□ -0.08
ZNF140P52738 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF140P52738 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF140P52738 AL160314.3-201ENST00000556041 767 ntBASIC14.53□□□□□ -0.08
ZNF140P52738 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF140P52738 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF140P52738 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF140P52738 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ZNF140P52738 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF140P52738 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.53□□□□□ -0.08
ZNF140P52738 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
ZNF140P52738 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ZNF140P52738 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 AL161772.1-201ENST00000610494 4412 ntBASIC14.53□□□□□ -0.08
ZNF140P52738 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF140P52738 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF140P52738 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
ZNF140P52738 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ZNF140P52738 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ZNF140P52738 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF140P52738 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF140P52738 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF140P52738 AC144522.1-201ENST00000625111 1658 ntBASIC14.52□□□□□ -0.08
ZNF140P52738 CYP4F23P-201ENST00000593402 1579 ntBASIC14.52□□□□□ -0.08
ZNF140P52738 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF140P52738 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
ZNF140P52738 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.52□□□□□ -0.08
ZNF140P52738 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.08
ZNF140P52738 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
ZNF140P52738 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ZNF140P52738 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF140P52738 BTBD6P1-201ENST00000412176 1267 ntBASIC14.52□□□□□ -0.09
ZNF140P52738 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF140P52738 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF140P52738 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
ZNF140P52738 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ZNF140P52738 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF140P52738 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.52□□□□□ -0.09
ZNF140P52738 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF140P52738 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF140P52738 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF140P52738 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.52□□□□□ -0.09
ZNF140P52738 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF140P52738 AC005695.3-201ENST00000614522 232 ntBASIC14.52□□□□□ -0.09
ZNF140P52738 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF140P52738 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
ZNF140P52738 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF140P52738 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF140P52738 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF140P52738 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF140P52738 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF140P52738 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ZNF140P52738 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF140P52738 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF140P52738 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF140P52738 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF140P52738 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF140P52738 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF140P52738 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ZNF140P52738 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF140P52738 OR2I1P-210ENST00000642037 4691 ntBASIC14.51□□□□□ -0.09
ZNF140P52738 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF140P52738 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ZNF140P52738 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms