Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
USP11P51784 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.5■□□□□ 0.23
USP11P51784 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.5■□□□□ 0.23
USP11P51784 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.5■□□□□ 0.23
USP11P51784 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
USP11P51784 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
USP11P51784 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.49■□□□□ 0.23
USP11P51784 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.49■□□□□ 0.23
USP11P51784 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.49■□□□□ 0.23
USP11P51784 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
USP11P51784 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.49■□□□□ 0.23
USP11P51784 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
USP11P51784 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
USP11P51784 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.49■□□□□ 0.23
USP11P51784 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.49■□□□□ 0.23
USP11P51784 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.49■□□□□ 0.23
USP11P51784 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.49■□□□□ 0.23
USP11P51784 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.49■□□□□ 0.23
USP11P51784 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 AL645939.5-201ENST00000606834 243 ntBASIC16.49■□□□□ 0.23
USP11P51784 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.49■□□□□ 0.23
USP11P51784 AC100757.4-201ENST00000626934 759 ntBASIC16.49■□□□□ 0.23
USP11P51784 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
USP11P51784 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
USP11P51784 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.49■□□□□ 0.23
USP11P51784 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.49■□□□□ 0.23
USP11P51784 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.49■□□□□ 0.23
USP11P51784 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP11P51784 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
USP11P51784 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
USP11P51784 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.48■□□□□ 0.23
USP11P51784 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.48■□□□□ 0.23
USP11P51784 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.48■□□□□ 0.23
USP11P51784 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.48■□□□□ 0.23
USP11P51784 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.48■□□□□ 0.23
USP11P51784 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.48■□□□□ 0.23
USP11P51784 FNTAP2-201ENST00000430308 634 ntBASIC16.48■□□□□ 0.23
USP11P51784 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 AC099548.2-209ENST00000480264 625 ntBASIC16.48■□□□□ 0.23
USP11P51784 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.48■□□□□ 0.23
USP11P51784 AC103810.3-201ENST00000583567 96 ntBASIC16.48■□□□□ 0.23
USP11P51784 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.48■□□□□ 0.23
USP11P51784 AC026740.1-201ENST00000607068 791 ntBASIC16.48■□□□□ 0.23
USP11P51784 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.48■□□□□ 0.23
USP11P51784 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
USP11P51784 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP11P51784 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
USP11P51784 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
USP11P51784 AC018629.1-201ENST00000623381 1736 ntBASIC16.48■□□□□ 0.23
USP11P51784 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
USP11P51784 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
USP11P51784 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
USP11P51784 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
USP11P51784 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
USP11P51784 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.47■□□□□ 0.23
USP11P51784 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
USP11P51784 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.47■□□□□ 0.23
USP11P51784 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
USP11P51784 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
USP11P51784 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms