Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HCFC1P51610 KRT8P28-201ENST00000433288 1390 ntBASIC12.68□□□□□ -0.38
HCFC1P51610 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.67□□□□□ -0.38
HCFC1P51610 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC12.67□□□□□ -0.38
HCFC1P51610 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC12.67□□□□□ -0.38
HCFC1P51610 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.67□□□□□ -0.38
HCFC1P51610 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.67□□□□□ -0.38
HCFC1P51610 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.67□□□□□ -0.38
HCFC1P51610 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.67□□□□□ -0.38
HCFC1P51610 AL354861.1-201ENST00000445213 355 ntBASIC12.67□□□□□ -0.38
HCFC1P51610 AL157792.1-201ENST00000488281 530 ntBASIC12.67□□□□□ -0.38
HCFC1P51610 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.67□□□□□ -0.38
HCFC1P51610 NSD1-211ENST00000511258 809 ntTSL 3 BASIC12.67□□□□□ -0.38
HCFC1P51610 RNA5SP417-201ENST00000516459 108 ntBASIC12.67□□□□□ -0.38
HCFC1P51610 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.67□□□□□ -0.38
HCFC1P51610 AC138701.2-201ENST00000553634 226 ntBASIC12.67□□□□□ -0.38
HCFC1P51610 AL022344.2-201ENST00000568976 968 ntBASIC12.67□□□□□ -0.38
HCFC1P51610 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.67□□□□□ -0.38
HCFC1P51610 MIR2392-201ENST00000584881 84 ntBASIC12.67□□□□□ -0.38
HCFC1P51610 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.67□□□□□ -0.38
HCFC1P51610 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HCFC1P51610 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HCFC1P51610 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HCFC1P51610 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HCFC1P51610 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.67□□□□□ -0.38
HCFC1P51610 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.67□□□□□ -0.38
HCFC1P51610 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.67□□□□□ -0.38
HCFC1P51610 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.67□□□□□ -0.38
HCFC1P51610 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
HCFC1P51610 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.67□□□□□ -0.38
HCFC1P51610 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.67□□□□□ -0.38
HCFC1P51610 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
HCFC1P51610 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.67□□□□□ -0.38
HCFC1P51610 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.67□□□□□ -0.38
HCFC1P51610 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC12.67□□□□□ -0.38
HCFC1P51610 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.67□□□□□ -0.38
HCFC1P51610 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC12.67□□□□□ -0.38
HCFC1P51610 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.67□□□□□ -0.38
HCFC1P51610 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 AC003686.1-201ENST00000550956 1034 ntBASIC12.67□□□□□ -0.38
HCFC1P51610 AC093752.3-201ENST00000567343 901 ntBASIC12.67□□□□□ -0.38
HCFC1P51610 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HCFC1P51610 AC127024.7-201ENST00000625101 200 ntBASIC12.67□□□□□ -0.38
HCFC1P51610 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HCFC1P51610 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
HCFC1P51610 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.67□□□□□ -0.38
HCFC1P51610 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
HCFC1P51610 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HCFC1P51610 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.67□□□□□ -0.38
HCFC1P51610 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.67□□□□□ -0.38
HCFC1P51610 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HCFC1P51610 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.67□□□□□ -0.38
HCFC1P51610 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HCFC1P51610 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
HCFC1P51610 WASH3P-207ENST00000560956 1394 ntBASIC12.66□□□□□ -0.38
HCFC1P51610 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.66□□□□□ -0.38
HCFC1P51610 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.66□□□□□ -0.38
HCFC1P51610 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.66□□□□□ -0.38
HCFC1P51610 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HCFC1P51610 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.66□□□□□ -0.38
HCFC1P51610 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.66□□□□□ -0.38
HCFC1P51610 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HCFC1P51610 AC009560.1-201ENST00000620208 434 ntBASIC12.66□□□□□ -0.38
HCFC1P51610 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms