Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF144AP50876 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
RNF144AP50876 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 RN7SKP230-201ENST00000365642 335 ntBASIC13.74□□□□□ -0.21
RNF144AP50876 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
RNF144AP50876 POM121L8P-201ENST00000417732 1281 ntBASIC13.74□□□□□ -0.21
RNF144AP50876 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF144AP50876 NME2P1-201ENST00000426182 414 ntBASIC13.74□□□□□ -0.21
RNF144AP50876 AC245100.3-201ENST00000441281 285 ntBASIC13.74□□□□□ -0.21
RNF144AP50876 POM121L9P-203ENST00000441984 1285 ntBASIC13.74□□□□□ -0.21
RNF144AP50876 KRT17P7-201ENST00000451704 1104 ntBASIC13.74□□□□□ -0.21
RNF144AP50876 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF144AP50876 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF144AP50876 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.74□□□□□ -0.21
RNF144AP50876 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.74□□□□□ -0.21
RNF144AP50876 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF144AP50876 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF144AP50876 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF144AP50876 AC012645.4-201ENST00000610691 1061 ntBASIC13.74□□□□□ -0.21
RNF144AP50876 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF144AP50876 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RNF144AP50876 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RNF144AP50876 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF144AP50876 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RNF144AP50876 AL359881.3-201ENST00000602640 1721 ntBASIC13.73□□□□□ -0.21
RNF144AP50876 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF144AP50876 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF144AP50876 FKBP4P6-201ENST00000457486 1332 ntBASIC13.73□□□□□ -0.21
RNF144AP50876 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF144AP50876 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RNF144AP50876 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RNF144AP50876 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 AC092933.1-201ENST00000393644 945 ntBASIC13.73□□□□□ -0.21
RNF144AP50876 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RNF144AP50876 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC13.73□□□□□ -0.21
RNF144AP50876 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF144AP50876 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.73□□□□□ -0.21
RNF144AP50876 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF144AP50876 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF144AP50876 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RNF144AP50876 AC107308.1-201ENST00000615897 301 ntBASIC13.73□□□□□ -0.21
RNF144AP50876 AL034417.3-201ENST00000641100 1043 ntBASIC13.73□□□□□ -0.21
RNF144AP50876 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF144AP50876 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF144AP50876 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 AL928921.2-201ENST00000641325 2442 ntBASIC13.73□□□□□ -0.21
RNF144AP50876 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RNF144AP50876 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF144AP50876 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF144AP50876 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF144AP50876 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RNF144AP50876 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF144AP50876 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF144AP50876 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RNF144AP50876 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RNF144AP50876 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF144AP50876 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF144AP50876 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF144AP50876 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RNF144AP50876 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF144AP50876 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF144AP50876 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RNF144AP50876 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF144AP50876 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms