Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
SRP9P49458 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.11□□□□□ -0.31
SRP9P49458 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 ENPP7P5-201ENST00000541031 1031 ntBASIC13.11□□□□□ -0.31
SRP9P49458 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.11□□□□□ -0.31
SRP9P49458 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.11□□□□□ -0.31
SRP9P49458 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.11□□□□□ -0.31
SRP9P49458 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.11□□□□□ -0.31
SRP9P49458 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 AC107373.2-201ENST00000607735 490 ntBASIC13.11□□□□□ -0.31
SRP9P49458 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
SRP9P49458 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.11□□□□□ -0.31
SRP9P49458 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.11□□□□□ -0.31
SRP9P49458 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SRP9P49458 AC025048.6-201ENST00000634326 1161 ntBASIC13.11□□□□□ -0.31
SRP9P49458 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.11□□□□□ -0.31
SRP9P49458 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.11□□□□□ -0.31
SRP9P49458 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.11□□□□□ -0.31
SRP9P49458 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.11□□□□□ -0.31
SRP9P49458 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.11□□□□□ -0.31
SRP9P49458 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 AC015909.5-201ENST00000624336 2266 ntBASIC13.11□□□□□ -0.31
SRP9P49458 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.11□□□□□ -0.31
SRP9P49458 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.11□□□□□ -0.31
SRP9P49458 KRT8P24-201ENST00000560290 1559 ntBASIC13.11□□□□□ -0.31
SRP9P49458 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.11□□□□□ -0.31
SRP9P49458 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.1□□□□□ -0.31
SRP9P49458 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.1□□□□□ -0.31
SRP9P49458 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 AC012508.2-201ENST00000567613 1472 ntBASIC13.1□□□□□ -0.31
SRP9P49458 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.1□□□□□ -0.31
SRP9P49458 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SRP9P49458 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.1□□□□□ -0.31
SRP9P49458 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.1□□□□□ -0.31
SRP9P49458 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SRP9P49458 AC118758.2-201ENST00000614242 2813 ntBASIC13.1□□□□□ -0.31
SRP9P49458 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
SRP9P49458 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
SRP9P49458 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.1□□□□□ -0.31
SRP9P49458 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.1□□□□□ -0.31
SRP9P49458 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 DGCR5-201ENST00000399539 862 ntBASIC13.1□□□□□ -0.31
SRP9P49458 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.1□□□□□ -0.31
SRP9P49458 AC098850.1-201ENST00000419919 790 ntBASIC13.1□□□□□ -0.31
SRP9P49458 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.1□□□□□ -0.31
SRP9P49458 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.1□□□□□ -0.31
SRP9P49458 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SRP9P49458 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.1□□□□□ -0.31
SRP9P49458 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SRP9P49458 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.1□□□□□ -0.31
SRP9P49458 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.1□□□□□ -0.31
SRP9P49458 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.1□□□□□ -0.31
SRP9P49458 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SRP9P49458 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.1□□□□□ -0.31
SRP9P49458 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.1□□□□□ -0.31
SRP9P49458 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SRP9P49458 KRT8P22-201ENST00000562317 1415 ntBASIC13.1□□□□□ -0.31
SRP9P49458 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.1□□□□□ -0.31
SRP9P49458 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.1□□□□□ -0.31
SRP9P49458 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.1□□□□□ -0.31
SRP9P49458 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.1□□□□□ -0.31
SRP9P49458 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.1□□□□□ -0.31
SRP9P49458 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SRP9P49458 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms