Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CDC34P49427 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CDC34P49427 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.67□□□□□ -0.54
CDC34P49427 CD81-202ENST00000381036 880 ntTSL 3 BASIC11.67□□□□□ -0.54
CDC34P49427 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC11.67□□□□□ -0.54
CDC34P49427 FAAHP1-202ENST00000446499 1238 ntBASIC11.67□□□□□ -0.54
CDC34P49427 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.67□□□□□ -0.54
CDC34P49427 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.67□□□□□ -0.54
CDC34P49427 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC11.67□□□□□ -0.54
CDC34P49427 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.67□□□□□ -0.54
CDC34P49427 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.67□□□□□ -0.54
CDC34P49427 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.67□□□□□ -0.54
CDC34P49427 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.67□□□□□ -0.54
CDC34P49427 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CDC34P49427 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.67□□□□□ -0.54
CDC34P49427 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 HSPA8P5-201ENST00000456928 2069 ntBASIC11.67□□□□□ -0.54
CDC34P49427 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
CDC34P49427 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC11.67□□□□□ -0.54
CDC34P49427 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.67□□□□□ -0.54
CDC34P49427 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CDC34P49427 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CDC34P49427 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
CDC34P49427 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.67□□□□□ -0.54
CDC34P49427 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CDC34P49427 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.67□□□□□ -0.54
CDC34P49427 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.67□□□□□ -0.54
CDC34P49427 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CDC34P49427 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC34P49427 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CDC34P49427 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
CDC34P49427 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.66□□□□□ -0.54
CDC34P49427 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.66□□□□□ -0.54
CDC34P49427 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.66□□□□□ -0.54
CDC34P49427 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
CDC34P49427 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CDC34P49427 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC34P49427 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC34P49427 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC34P49427 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
CDC34P49427 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CDC34P49427 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
CDC34P49427 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC34P49427 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 MRPL3P1-201ENST00000400109 1033 ntBASIC11.66□□□□□ -0.54
CDC34P49427 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.66□□□□□ -0.54
CDC34P49427 HLA-K-203ENST00000430151 1046 ntBASIC11.66□□□□□ -0.54
CDC34P49427 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.66□□□□□ -0.54
CDC34P49427 AL079307.3-201ENST00000556114 283 ntBASIC11.66□□□□□ -0.54
CDC34P49427 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.66□□□□□ -0.54
CDC34P49427 RPS15-202ENST00000585665 467 ntTSL 3 BASIC11.66□□□□□ -0.54
CDC34P49427 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 AC092364.2-202ENST00000597012 1073 ntBASIC11.66□□□□□ -0.54
CDC34P49427 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 LINC01115-203ENST00000606068 577 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms