Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.3□□□□□ -0.12
KRT6CP48668 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT6CP48668 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
KRT6CP48668 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
KRT6CP48668 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
KRT6CP48668 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
KRT6CP48668 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.29□□□□□ -0.12
KRT6CP48668 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KRT6CP48668 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.29□□□□□ -0.12
KRT6CP48668 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
KRT6CP48668 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.29□□□□□ -0.12
KRT6CP48668 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.29□□□□□ -0.12
KRT6CP48668 POM121L8P-201ENST00000417732 1281 ntBASIC14.29□□□□□ -0.12
KRT6CP48668 POM121L9P-203ENST00000441984 1285 ntBASIC14.29□□□□□ -0.12
KRT6CP48668 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.29□□□□□ -0.12
KRT6CP48668 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.29□□□□□ -0.12
KRT6CP48668 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
KRT6CP48668 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.29□□□□□ -0.12
KRT6CP48668 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.29□□□□□ -0.12
KRT6CP48668 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
KRT6CP48668 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.29□□□□□ -0.12
KRT6CP48668 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.29□□□□□ -0.12
KRT6CP48668 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 FKBP4P6-201ENST00000457486 1332 ntBASIC14.29□□□□□ -0.12
KRT6CP48668 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
KRT6CP48668 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.29□□□□□ -0.12
KRT6CP48668 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.29□□□□□ -0.12
KRT6CP48668 AC215219.1-201ENST00000400706 1817 ntBASIC14.29□□□□□ -0.12
KRT6CP48668 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.29□□□□□ -0.12
KRT6CP48668 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6CP48668 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KRT6CP48668 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
KRT6CP48668 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.28□□□□□ -0.12
KRT6CP48668 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
KRT6CP48668 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
KRT6CP48668 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KRT6CP48668 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KRT6CP48668 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 DGCR5-201ENST00000399539 862 ntBASIC14.28□□□□□ -0.12
KRT6CP48668 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
KRT6CP48668 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
KRT6CP48668 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.28□□□□□ -0.12
KRT6CP48668 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
KRT6CP48668 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
KRT6CP48668 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.28□□□□□ -0.12
KRT6CP48668 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.28□□□□□ -0.12
KRT6CP48668 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.28□□□□□ -0.12
KRT6CP48668 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
KRT6CP48668 AC068587.3-201ENST00000526613 355 ntBASIC14.28□□□□□ -0.12
KRT6CP48668 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
KRT6CP48668 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.28□□□□□ -0.12
KRT6CP48668 TDH-203ENST00000531764 1110 ntBASIC14.28□□□□□ -0.12
KRT6CP48668 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.28□□□□□ -0.12
KRT6CP48668 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
KRT6CP48668 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
KRT6CP48668 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.28□□□□□ -0.12
KRT6CP48668 AC020910.6-201ENST00000623084 1459 ntBASIC14.28□□□□□ -0.12
KRT6CP48668 AC016397.2-201ENST00000624848 1985 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms