Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RPA3P35244 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.89□□□□□ -0.03
RPA3P35244 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
RPA3P35244 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.88□□□□□ -0.03
RPA3P35244 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RPA3P35244 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
RPA3P35244 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 AC019294.4-201ENST00000561777 2905 ntBASIC14.88□□□□□ -0.03
RPA3P35244 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
RPA3P35244 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.88□□□□□ -0.03
RPA3P35244 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.88□□□□□ -0.03
RPA3P35244 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.88□□□□□ -0.03
RPA3P35244 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.88□□□□□ -0.03
RPA3P35244 AL162726.2-201ENST00000438986 1017 ntBASIC14.88□□□□□ -0.03
RPA3P35244 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.88□□□□□ -0.03
RPA3P35244 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 AC124283.3-201ENST00000570869 594 ntBASIC14.88□□□□□ -0.03
RPA3P35244 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.88□□□□□ -0.03
RPA3P35244 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.88□□□□□ -0.03
RPA3P35244 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RPA3P35244 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
RPA3P35244 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.88□□□□□ -0.03
RPA3P35244 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.88□□□□□ -0.03
RPA3P35244 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 AC090643.2-201ENST00000623442 2029 ntBASIC14.88□□□□□ -0.03
RPA3P35244 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RPA3P35244 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.88□□□□□ -0.03
RPA3P35244 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RPA3P35244 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPA3P35244 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RPA3P35244 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 AC215219.1-201ENST00000400706 1817 ntBASIC14.87□□□□□ -0.03
RPA3P35244 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.87□□□□□ -0.03
RPA3P35244 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.87□□□□□ -0.03
RPA3P35244 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.87□□□□□ -0.03
RPA3P35244 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.87□□□□□ -0.03
RPA3P35244 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.87□□□□□ -0.03
RPA3P35244 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RPA3P35244 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RPA3P35244 AC098614.1-201ENST00000368528 745 ntBASIC14.87□□□□□ -0.03
RPA3P35244 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.87□□□□□ -0.03
RPA3P35244 AL645937.2-201ENST00000396808 931 ntBASIC14.87□□□□□ -0.03
RPA3P35244 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.87□□□□□ -0.03
RPA3P35244 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.87□□□□□ -0.03
RPA3P35244 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.87□□□□□ -0.03
RPA3P35244 RN7SL692P-201ENST00000464677 288 ntBASIC14.87□□□□□ -0.03
RPA3P35244 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.87□□□□□ -0.03
RPA3P35244 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.87□□□□□ -0.03
RPA3P35244 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RPA3P35244 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.87□□□□□ -0.03
RPA3P35244 AP001582.1-201ENST00000525856 295 ntBASIC14.87□□□□□ -0.03
RPA3P35244 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.87□□□□□ -0.03
RPA3P35244 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.87□□□□□ -0.03
RPA3P35244 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.87□□□□□ -0.03
RPA3P35244 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.87□□□□□ -0.03
RPA3P35244 CU634019.7-201ENST00000624153 1185 ntBASIC14.87□□□□□ -0.03
RPA3P35244 FP236241.2-201ENST00000624906 1185 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms