Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPS1P31327 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPS1P31327 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPS1P31327 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CPS1P31327 RPL3P2-204ENST00000413027 1203 ntBASIC20.05■□□□□ 0.8
CPS1P31327 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC20.05■□□□□ 0.8
CPS1P31327 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC20.05■□□□□ 0.8
CPS1P31327 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC20.05■□□□□ 0.8
CPS1P31327 AC008494.1-201ENST00000497612 796 ntBASIC20.05■□□□□ 0.8
CPS1P31327 RN7SKP155-201ENST00000516031 288 ntBASIC20.05■□□□□ 0.8
CPS1P31327 AC005586.2-201ENST00000563946 837 ntBASIC20.05■□□□□ 0.8
CPS1P31327 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC20.05■□□□□ 0.8
CPS1P31327 NAT9-219ENST00000582524 573 ntTSL 4 BASIC20.05■□□□□ 0.8
CPS1P31327 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC20.05■□□□□ 0.8
CPS1P31327 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC20.05■□□□□ 0.8
CPS1P31327 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC20.05■□□□□ 0.8
CPS1P31327 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC20.05■□□□□ 0.8
CPS1P31327 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
CPS1P31327 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
CPS1P31327 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPS1P31327 FAM226B-201ENST00000602508 1490 ntBASIC20.05■□□□□ 0.8
CPS1P31327 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC20.05■□□□□ 0.8
CPS1P31327 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CPS1P31327 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CPS1P31327 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPS1P31327 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPS1P31327 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC20.04■□□□□ 0.8
CPS1P31327 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC20.04■□□□□ 0.8
CPS1P31327 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPS1P31327 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPS1P31327 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.04■□□□□ 0.8
CPS1P31327 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CPS1P31327 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPS1P31327 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
CPS1P31327 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPS1P31327 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPS1P31327 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC20.04■□□□□ 0.8
CPS1P31327 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC20.04■□□□□ 0.8
CPS1P31327 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPS1P31327 AC073210.1-201ENST00000414799 232 ntBASIC20.04■□□□□ 0.8
CPS1P31327 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPS1P31327 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC20.04■□□□□ 0.8
CPS1P31327 HNRNPA1P21-201ENST00000424115 961 ntBASIC20.04■□□□□ 0.8
CPS1P31327 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC20.04■□□□□ 0.8
CPS1P31327 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC20.04■□□□□ 0.8
CPS1P31327 FDPSP7-201ENST00000429043 1054 ntBASIC20.04■□□□□ 0.8
CPS1P31327 ZNF877P-201ENST00000437614 612 ntBASIC20.04■□□□□ 0.8
CPS1P31327 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC20.04■□□□□ 0.8
CPS1P31327 AC022447.5-201ENST00000504817 392 ntBASIC20.04■□□□□ 0.8
CPS1P31327 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC20.04■□□□□ 0.8
CPS1P31327 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC20.04■□□□□ 0.8
CPS1P31327 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC20.04■□□□□ 0.8
CPS1P31327 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC20.04■□□□□ 0.8
CPS1P31327 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC20.04■□□□□ 0.8
CPS1P31327 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPS1P31327 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPS1P31327 AL021707.6-201ENST00000609212 491 ntBASIC20.04■□□□□ 0.8
CPS1P31327 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPS1P31327 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPS1P31327 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPS1P31327 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPS1P31327 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPS1P31327 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPS1P31327 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CPS1P31327 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CPS1P31327 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC20.03■□□□□ 0.8
CPS1P31327 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20.03■□□□□ 0.8
CPS1P31327 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CPS1P31327 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CPS1P31327 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CPS1P31327 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC20.03■□□□□ 0.8
CPS1P31327 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC20.03■□□□□ 0.8
CPS1P31327 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC20.03■□□□□ 0.8
CPS1P31327 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC20.03■□□□□ 0.8
CPS1P31327 AC026336.4-201ENST00000624565 1050 ntBASIC20.03■□□□□ 0.8
CPS1P31327 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 AC018442.1-201ENST00000421439 2061 ntBASIC20.03■□□□□ 0.8
CPS1P31327 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CPS1P31327 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.03■□□□□ 0.8
CPS1P31327 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC20.03■□□□□ 0.8
CPS1P31327 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC20.03■□□□□ 0.8
CPS1P31327 CCT8L1P-201ENST00000465400 1674 ntBASIC20.03■□□□□ 0.8
CPS1P31327 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC20.03■□□□□ 0.8
CPS1P31327 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms