Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF1P30408 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TM4SF1P30408 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF1P30408 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF1P30408 ASS1P2-201ENST00000439895 1223 ntBASIC17.79■□□□□ 0.44
TM4SF1P30408 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.79■□□□□ 0.44
TM4SF1P30408 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TM4SF1P30408 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC17.79■□□□□ 0.44
TM4SF1P30408 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC17.79■□□□□ 0.44
TM4SF1P30408 AC023968.2-201ENST00000560593 1049 ntBASIC17.79■□□□□ 0.44
TM4SF1P30408 CES1P2-201ENST00000566467 1242 ntBASIC17.79■□□□□ 0.44
TM4SF1P30408 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC17.79■□□□□ 0.44
TM4SF1P30408 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC17.79■□□□□ 0.44
TM4SF1P30408 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC17.79■□□□□ 0.44
TM4SF1P30408 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC17.79■□□□□ 0.44
TM4SF1P30408 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC17.79■□□□□ 0.44
TM4SF1P30408 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF1P30408 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TM4SF1P30408 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.79■□□□□ 0.44
TM4SF1P30408 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF1P30408 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF1P30408 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF1P30408 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF1P30408 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TM4SF1P30408 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF1P30408 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF1P30408 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
TM4SF1P30408 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF1P30408 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.78■□□□□ 0.44
TM4SF1P30408 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.78■□□□□ 0.44
TM4SF1P30408 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.78■□□□□ 0.44
TM4SF1P30408 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.78■□□□□ 0.44
TM4SF1P30408 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 AC073347.1-201ENST00000421633 2643 ntBASIC17.78■□□□□ 0.44
TM4SF1P30408 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TM4SF1P30408 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TM4SF1P30408 AF274858.1-201ENST00000406288 372 ntBASIC17.78■□□□□ 0.44
TM4SF1P30408 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.78■□□□□ 0.44
TM4SF1P30408 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC17.78■□□□□ 0.44
TM4SF1P30408 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC17.78■□□□□ 0.44
TM4SF1P30408 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 F11R-204ENST00000537746 1245 ntTSL 2 BASIC17.78■□□□□ 0.44
TM4SF1P30408 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.78■□□□□ 0.44
TM4SF1P30408 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC17.78■□□□□ 0.44
TM4SF1P30408 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC17.78■□□□□ 0.44
TM4SF1P30408 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.78■□□□□ 0.44
TM4SF1P30408 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 MYADML-201ENST00000474610 2147 ntBASIC17.78■□□□□ 0.44
TM4SF1P30408 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 AJ011931.1-201ENST00000618749 2492 ntBASIC17.78■□□□□ 0.44
TM4SF1P30408 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.78■□□□□ 0.44
TM4SF1P30408 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.78■□□□□ 0.44
TM4SF1P30408 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TM4SF1P30408 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.78■□□□□ 0.44
TM4SF1P30408 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM4SF1P30408 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TM4SF1P30408 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TM4SF1P30408 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TM4SF1P30408 AC105917.1-201ENST00000506637 2539 ntBASIC17.77■□□□□ 0.44
TM4SF1P30408 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.77■□□□□ 0.44
TM4SF1P30408 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM4SF1P30408 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC17.77■□□□□ 0.44
TM4SF1P30408 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM4SF1P30408 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.77■□□□□ 0.44
TM4SF1P30408 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TM4SF1P30408 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TM4SF1P30408 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TM4SF1P30408 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.77■□□□□ 0.44
TM4SF1P30408 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM4SF1P30408 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC17.77■□□□□ 0.44
TM4SF1P30408 AL080243.1-201ENST00000423293 1060 ntBASIC17.77■□□□□ 0.44
TM4SF1P30408 RN7SL128P-201ENST00000467883 305 ntBASIC17.77■□□□□ 0.44
TM4SF1P30408 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC17.77■□□□□ 0.44
TM4SF1P30408 RN7SKP155-201ENST00000516031 288 ntBASIC17.77■□□□□ 0.44
TM4SF1P30408 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TM4SF1P30408 BATF-202ENST00000555504 361 ntTSL 2 BASIC17.77■□□□□ 0.44
TM4SF1P30408 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC17.77■□□□□ 0.44
TM4SF1P30408 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC17.77■□□□□ 0.44
TM4SF1P30408 APOC1-209ENST00000592885 562 ntTSL 3 BASIC17.77■□□□□ 0.44
TM4SF1P30408 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM4SF1P30408 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms