Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 AC009093.10-201ENST00000641956 1442 ntBASIC14.55□□□□□ -0.08
GABRB3P28472 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRB3P28472 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRB3P28472 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.55□□□□□ -0.08
GABRB3P28472 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GABRB3P28472 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRB3P28472 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRB3P28472 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.55□□□□□ -0.08
GABRB3P28472 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.55□□□□□ -0.08
GABRB3P28472 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GABRB3P28472 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GABRB3P28472 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRB3P28472 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRB3P28472 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRB3P28472 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
GABRB3P28472 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.54□□□□□ -0.08
GABRB3P28472 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
GABRB3P28472 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.54□□□□□ -0.08
GABRB3P28472 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
GABRB3P28472 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.54□□□□□ -0.08
GABRB3P28472 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
GABRB3P28472 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.54□□□□□ -0.08
GABRB3P28472 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
GABRB3P28472 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
GABRB3P28472 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 COX5BP8-201ENST00000416911 349 ntBASIC14.54□□□□□ -0.08
GABRB3P28472 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.54□□□□□ -0.08
GABRB3P28472 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.54□□□□□ -0.08
GABRB3P28472 CHMP1AP1-201ENST00000445563 662 ntBASIC14.54□□□□□ -0.08
GABRB3P28472 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.54□□□□□ -0.08
GABRB3P28472 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.54□□□□□ -0.08
GABRB3P28472 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.54□□□□□ -0.08
GABRB3P28472 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.54□□□□□ -0.08
GABRB3P28472 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.54□□□□□ -0.08
GABRB3P28472 AC104506.1-201ENST00000609247 429 ntBASIC14.54□□□□□ -0.08
GABRB3P28472 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.54□□□□□ -0.08
GABRB3P28472 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.54□□□□□ -0.08
GABRB3P28472 AC027601.3-201ENST00000622907 509 ntBASIC14.54□□□□□ -0.08
GABRB3P28472 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.54□□□□□ -0.08
GABRB3P28472 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.54□□□□□ -0.08
GABRB3P28472 CU639417.3-201ENST00000624240 1404 ntBASIC14.54□□□□□ -0.08
GABRB3P28472 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.54□□□□□ -0.08
GABRB3P28472 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.54□□□□□ -0.08
GABRB3P28472 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
GABRB3P28472 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.54□□□□□ -0.08
GABRB3P28472 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.54□□□□□ -0.08
GABRB3P28472 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
GABRB3P28472 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.54□□□□□ -0.08
GABRB3P28472 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 AC111170.3-201ENST00000624282 2464 ntBASIC14.54□□□□□ -0.08
GABRB3P28472 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
GABRB3P28472 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.54□□□□□ -0.08
GABRB3P28472 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRB3P28472 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRB3P28472 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.53□□□□□ -0.08
GABRB3P28472 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
GABRB3P28472 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRB3P28472 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRB3P28472 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GABRB3P28472 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.53□□□□□ -0.08
GABRB3P28472 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRB3P28472 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GABRB3P28472 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRB3P28472 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRB3P28472 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.53□□□□□ -0.08
GABRB3P28472 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRB3P28472 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.53□□□□□ -0.08
GABRB3P28472 AL354989.2-201ENST00000435838 1540 ntBASIC14.53□□□□□ -0.08
GABRB3P28472 KRT8P4-201ENST00000509735 1454 ntBASIC14.53□□□□□ -0.08
GABRB3P28472 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.53□□□□□ -0.08
GABRB3P28472 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GABRB3P28472 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.53□□□□□ -0.08
GABRB3P28472 TUBB8P4-201ENST00000511806 1324 ntBASIC14.53□□□□□ -0.08
GABRB3P28472 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GABRB3P28472 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.53□□□□□ -0.08
GABRB3P28472 AL136309.1-201ENST00000403917 691 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms