Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.4□□□□□ -0.42
COL8A2P25067 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
COL8A2P25067 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
COL8A2P25067 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.4□□□□□ -0.42
COL8A2P25067 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
COL8A2P25067 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
COL8A2P25067 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
COL8A2P25067 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
COL8A2P25067 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
COL8A2P25067 AL662890.1-201ENST00000396818 632 ntBASIC12.4□□□□□ -0.42
COL8A2P25067 AL008707.1-201ENST00000422498 534 ntBASIC12.4□□□□□ -0.42
COL8A2P25067 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 AL157407.1-201ENST00000435784 904 ntBASIC12.4□□□□□ -0.42
COL8A2P25067 AC011742.3-201ENST00000439053 820 ntBASIC12.4□□□□□ -0.42
COL8A2P25067 Z97180.1-201ENST00000445173 988 ntBASIC12.4□□□□□ -0.42
COL8A2P25067 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.4□□□□□ -0.42
COL8A2P25067 MARK2P5-201ENST00000507649 634 ntBASIC12.4□□□□□ -0.42
COL8A2P25067 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.4□□□□□ -0.42
COL8A2P25067 AL160314.3-201ENST00000556041 767 ntBASIC12.4□□□□□ -0.42
COL8A2P25067 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.4□□□□□ -0.42
COL8A2P25067 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.4□□□□□ -0.42
COL8A2P25067 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 AL805961.1-203ENST00000641078 1258 ntBASIC12.4□□□□□ -0.42
COL8A2P25067 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 AC018442.1-201ENST00000421439 2061 ntBASIC12.4□□□□□ -0.42
COL8A2P25067 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.4□□□□□ -0.42
COL8A2P25067 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL8A2P25067 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
COL8A2P25067 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
COL8A2P25067 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
COL8A2P25067 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
COL8A2P25067 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
COL8A2P25067 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
COL8A2P25067 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
COL8A2P25067 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
COL8A2P25067 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.4□□□□□ -0.43
COL8A2P25067 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
COL8A2P25067 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
COL8A2P25067 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
COL8A2P25067 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
COL8A2P25067 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.39□□□□□ -0.43
COL8A2P25067 AC092135.3-201ENST00000624151 1846 ntBASIC12.39□□□□□ -0.43
COL8A2P25067 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.39□□□□□ -0.43
COL8A2P25067 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.39□□□□□ -0.43
COL8A2P25067 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
COL8A2P25067 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 AC097359.2-201ENST00000604992 2389 ntBASIC12.39□□□□□ -0.43
COL8A2P25067 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.39□□□□□ -0.43
COL8A2P25067 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.39□□□□□ -0.43
COL8A2P25067 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.39□□□□□ -0.43
COL8A2P25067 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.39□□□□□ -0.43
COL8A2P25067 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.39□□□□□ -0.43
COL8A2P25067 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.39□□□□□ -0.43
COL8A2P25067 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.39□□□□□ -0.43
COL8A2P25067 RN7SL11P-201ENST00000471305 293 ntBASIC12.39□□□□□ -0.43
COL8A2P25067 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.39□□□□□ -0.43
COL8A2P25067 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.39□□□□□ -0.43
COL8A2P25067 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.39□□□□□ -0.43
COL8A2P25067 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.39□□□□□ -0.43
COL8A2P25067 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.39□□□□□ -0.43
COL8A2P25067 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.39□□□□□ -0.43
COL8A2P25067 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.39□□□□□ -0.43
COL8A2P25067 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
COL8A2P25067 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.39□□□□□ -0.43
COL8A2P25067 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.39□□□□□ -0.43
COL8A2P25067 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.39□□□□□ -0.43
COL8A2P25067 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms