Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMC1P11047 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LAMC1P11047 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMC1P11047 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC20.18■□□□□ 0.82
LAMC1P11047 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LAMC1P11047 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LAMC1P11047 AC103592.1-201ENST00000394513 664 ntBASIC20.18■□□□□ 0.82
LAMC1P11047 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
LAMC1P11047 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC20.18■□□□□ 0.82
LAMC1P11047 AC005740.1-201ENST00000515639 522 ntBASIC20.18■□□□□ 0.82
LAMC1P11047 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LAMC1P11047 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC20.18■□□□□ 0.82
LAMC1P11047 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC20.18■□□□□ 0.82
LAMC1P11047 BAP1-211ENST00000615113 489 ntBASIC20.18■□□□□ 0.82
LAMC1P11047 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC20.18■□□□□ 0.82
LAMC1P11047 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LAMC1P11047 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
LAMC1P11047 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LAMC1P11047 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC20.18■□□□□ 0.82
LAMC1P11047 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC20.18■□□□□ 0.82
LAMC1P11047 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LAMC1P11047 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC20.18■□□□□ 0.82
LAMC1P11047 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC20.18■□□□□ 0.82
LAMC1P11047 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LAMC1P11047 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC20.18■□□□□ 0.82
LAMC1P11047 AC152010.1-201ENST00000415779 2006 ntBASIC20.18■□□□□ 0.82
LAMC1P11047 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC20.18■□□□□ 0.82
LAMC1P11047 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC20.17■□□□□ 0.82
LAMC1P11047 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LAMC1P11047 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LAMC1P11047 HSPA7-201ENST00000445535 1927 ntBASIC20.17■□□□□ 0.82
LAMC1P11047 AREG-202ENST00000502307 956 ntTSL 5 BASIC20.17■□□□□ 0.82
LAMC1P11047 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC20.17■□□□□ 0.82
LAMC1P11047 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC20.17■□□□□ 0.82
LAMC1P11047 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LAMC1P11047 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LAMC1P11047 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.17■□□□□ 0.82
LAMC1P11047 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LAMC1P11047 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LAMC1P11047 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LAMC1P11047 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC20.17■□□□□ 0.82
LAMC1P11047 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LAMC1P11047 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LAMC1P11047 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC20.16■□□□□ 0.82
LAMC1P11047 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC20.16■□□□□ 0.82
LAMC1P11047 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC20.16■□□□□ 0.82
LAMC1P11047 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC20.16■□□□□ 0.82
LAMC1P11047 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC20.16■□□□□ 0.82
LAMC1P11047 RN7SL357P-201ENST00000581065 298 ntBASIC20.16■□□□□ 0.82
LAMC1P11047 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC20.16■□□□□ 0.82
LAMC1P11047 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LAMC1P11047 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LAMC1P11047 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC20.16■□□□□ 0.82
LAMC1P11047 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC20.16■□□□□ 0.82
LAMC1P11047 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LAMC1P11047 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LAMC1P11047 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LAMC1P11047 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC20.16■□□□□ 0.82
LAMC1P11047 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LAMC1P11047 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC20.16■□□□□ 0.82
LAMC1P11047 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC20.16■□□□□ 0.82
LAMC1P11047 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LAMC1P11047 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LAMC1P11047 TCAM1P-207ENST00000485295 1537 ntBASIC20.16■□□□□ 0.82
LAMC1P11047 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
LAMC1P11047 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LAMC1P11047 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LAMC1P11047 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LAMC1P11047 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC20.16■□□□□ 0.82
LAMC1P11047 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LAMC1P11047 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC20.16■□□□□ 0.82
LAMC1P11047 RN7SL788P-201ENST00000460504 316 ntBASIC20.16■□□□□ 0.82
LAMC1P11047 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LAMC1P11047 AC093909.3-201ENST00000504783 336 ntBASIC20.16■□□□□ 0.82
LAMC1P11047 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC20.16■□□□□ 0.82
LAMC1P11047 HERC2P11-201ENST00000562845 725 ntBASIC20.16■□□□□ 0.82
LAMC1P11047 AC100756.2-201ENST00000569537 736 ntBASIC20.16■□□□□ 0.82
LAMC1P11047 DGAT2L7P-201ENST00000602462 744 ntBASIC20.16■□□□□ 0.82
LAMC1P11047 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
LAMC1P11047 AC148477.9-201ENST00000623974 539 ntBASIC20.16■□□□□ 0.82
LAMC1P11047 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LAMC1P11047 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LAMC1P11047 AC002472.4-201ENST00000641915 272 ntBASIC20.16■□□□□ 0.82
LAMC1P11047 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
LAMC1P11047 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LAMC1P11047 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LAMC1P11047 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC20.15■□□□□ 0.82
LAMC1P11047 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC20.15■□□□□ 0.82
LAMC1P11047 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LAMC1P11047 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.15■□□□□ 0.82
LAMC1P11047 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LAMC1P11047 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC20.15■□□□□ 0.82
LAMC1P11047 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LAMC1P11047 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC20.15■□□□□ 0.82
LAMC1P11047 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LAMC1P11047 AC106881.1-201ENST00000605849 3329 ntBASIC20.15■□□□□ 0.82
LAMC1P11047 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LAMC1P11047 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LAMC1P11047 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LAMC1P11047 RNVU1-8-201ENST00000364272 125 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms