Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CTSBP07858 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
CTSBP07858 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSBP07858 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CTSBP07858 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CTSBP07858 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.8□□□□□ -0.2
CTSBP07858 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.8□□□□□ -0.2
CTSBP07858 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CTSBP07858 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CTSBP07858 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.8□□□□□ -0.2
CTSBP07858 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.8□□□□□ -0.2
CTSBP07858 AL008707.1-201ENST00000422498 534 ntBASIC13.8□□□□□ -0.2
CTSBP07858 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.8□□□□□ -0.2
CTSBP07858 UPF3AP2-201ENST00000457924 1132 ntBASIC13.8□□□□□ -0.2
CTSBP07858 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 RNA5SP423-201ENST00000517127 109 ntBASIC13.8□□□□□ -0.2
CTSBP07858 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSBP07858 AC134698.3-201ENST00000523880 214 ntBASIC13.8□□□□□ -0.2
CTSBP07858 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.8□□□□□ -0.2
CTSBP07858 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.8□□□□□ -0.2
CTSBP07858 AL161670.2-201ENST00000557650 1227 ntBASIC13.8□□□□□ -0.2
CTSBP07858 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSBP07858 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.8□□□□□ -0.2
CTSBP07858 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSBP07858 AC007718.1-201ENST00000621078 280 ntBASIC13.8□□□□□ -0.2
CTSBP07858 AC015967.2-201ENST00000624092 234 ntBASIC13.8□□□□□ -0.2
CTSBP07858 AC006435.4-201ENST00000625037 234 ntBASIC13.8□□□□□ -0.2
CTSBP07858 AL356737.1-201ENST00000634391 234 ntBASIC13.8□□□□□ -0.2
CTSBP07858 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CTSBP07858 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CTSBP07858 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.8□□□□□ -0.2
CTSBP07858 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CTSBP07858 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.8□□□□□ -0.2
CTSBP07858 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.8□□□□□ -0.2
CTSBP07858 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 AC005912.2-201ENST00000619492 2400 ntBASIC13.8□□□□□ -0.2
CTSBP07858 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.8□□□□□ -0.2
CTSBP07858 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSBP07858 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.8□□□□□ -0.2
CTSBP07858 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CTSBP07858 AP002353.1-201ENST00000528257 1599 ntBASIC13.79□□□□□ -0.2
CTSBP07858 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.79□□□□□ -0.2
CTSBP07858 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.79□□□□□ -0.2
CTSBP07858 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
CTSBP07858 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSBP07858 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.79□□□□□ -0.2
CTSBP07858 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSBP07858 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CTSBP07858 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTSBP07858 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSBP07858 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSBP07858 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CTSBP07858 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSBP07858 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSBP07858 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CTSBP07858 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.79□□□□□ -0.2
CTSBP07858 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSBP07858 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.79□□□□□ -0.2
CTSBP07858 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSBP07858 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSBP07858 AC239868.1-201ENST00000369385 493 ntBASIC13.79□□□□□ -0.2
CTSBP07858 OR2K2-202ENST00000374428 1038 ntBASIC13.79□□□□□ -0.2
CTSBP07858 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.79□□□□□ -0.2
CTSBP07858 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.79□□□□□ -0.2
CTSBP07858 AL133466.1-201ENST00000447582 150 ntBASIC13.79□□□□□ -0.2
CTSBP07858 RN7SL720P-201ENST00000488178 304 ntBASIC13.79□□□□□ -0.2
CTSBP07858 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.79□□□□□ -0.2
CTSBP07858 RTN3P1-201ENST00000536295 711 ntBASIC13.79□□□□□ -0.2
CTSBP07858 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTSBP07858 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.79□□□□□ -0.2
CTSBP07858 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.79□□□□□ -0.2
CTSBP07858 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTSBP07858 AL109837.1-201ENST00000603272 613 ntBASIC13.79□□□□□ -0.2
CTSBP07858 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.79□□□□□ -0.2
CTSBP07858 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.79□□□□□ -0.2
CTSBP07858 AC079336.7-201ENST00000623428 1078 ntBASIC13.79□□□□□ -0.2
CTSBP07858 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSBP07858 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.79□□□□□ -0.2
CTSBP07858 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSBP07858 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
CTSBP07858 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CTSBP07858 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms