Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.74■□□□□ 0.11
HLA-DRAP01903 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 AC005695.3-201ENST00000614522 232 ntBASIC15.74■□□□□ 0.11
HLA-DRAP01903 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DRAP01903 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRAP01903 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 AL591846.1-201ENST00000451736 433 ntBASIC15.73■□□□□ 0.11
HLA-DRAP01903 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 AC005962.1-201ENST00000584100 773 ntBASIC15.73■□□□□ 0.11
HLA-DRAP01903 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
HLA-DRAP01903 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRAP01903 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRAP01903 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DRAP01903 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms