Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 KRT18P4-201ENST00000422599 1288 ntBASIC18.83■□□□□ 0.6
LTN1O94822 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.83■□□□□ 0.6
LTN1O94822 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC18.83■□□□□ 0.6
LTN1O94822 EEF1GP8-201ENST00000506566 1154 ntBASIC18.83■□□□□ 0.6
LTN1O94822 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC18.83■□□□□ 0.6
LTN1O94822 CD44-224ENST00000526669 870 ntTSL 5 BASIC18.83■□□□□ 0.6
LTN1O94822 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC18.83■□□□□ 0.6
LTN1O94822 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC18.83■□□□□ 0.6
LTN1O94822 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LTN1O94822 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
LTN1O94822 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LTN1O94822 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
LTN1O94822 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
LTN1O94822 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LTN1O94822 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LTN1O94822 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LTN1O94822 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LTN1O94822 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.82■□□□□ 0.6
LTN1O94822 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LTN1O94822 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LTN1O94822 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC18.82■□□□□ 0.6
LTN1O94822 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC18.82■□□□□ 0.6
LTN1O94822 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC18.82■□□□□ 0.6
LTN1O94822 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC18.82■□□□□ 0.6
LTN1O94822 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC18.82■□□□□ 0.6
LTN1O94822 AC008026.2-201ENST00000495438 348 ntBASIC18.82■□□□□ 0.6
LTN1O94822 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC18.82■□□□□ 0.6
LTN1O94822 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
LTN1O94822 ABHD17AP9-201ENST00000561925 548 ntBASIC18.82■□□□□ 0.6
LTN1O94822 MIR4265-201ENST00000582152 99 ntBASIC18.82■□□□□ 0.6
LTN1O94822 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.82■□□□□ 0.6
LTN1O94822 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
LTN1O94822 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC18.82■□□□□ 0.6
LTN1O94822 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LTN1O94822 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LTN1O94822 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LTN1O94822 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC18.82■□□□□ 0.6
LTN1O94822 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
LTN1O94822 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
LTN1O94822 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LTN1O94822 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LTN1O94822 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC18.82■□□□□ 0.6
LTN1O94822 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LTN1O94822 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.81■□□□□ 0.6
LTN1O94822 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.81■□□□□ 0.6
LTN1O94822 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LTN1O94822 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 HMGA1P1-201ENST00000415560 1062 ntBASIC18.81■□□□□ 0.6
LTN1O94822 AL929302.1-201ENST00000426556 871 ntBASIC18.81■□□□□ 0.6
LTN1O94822 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC18.81■□□□□ 0.6
LTN1O94822 CISD2-202ENST00000503643 808 ntTSL 2 BASIC18.81■□□□□ 0.6
LTN1O94822 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LTN1O94822 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC18.81■□□□□ 0.6
LTN1O94822 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC18.81■□□□□ 0.6
LTN1O94822 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LTN1O94822 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 RHOC-205ENST00000369636 786 ntTSL 2 BASIC18.81■□□□□ 0.6
LTN1O94822 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC18.81■□□□□ 0.6
LTN1O94822 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC18.81■□□□□ 0.6
LTN1O94822 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 HNRNPA1P2-207ENST00000432375 960 ntBASIC18.81■□□□□ 0.6
LTN1O94822 DDX39AP1-201ENST00000445147 1181 ntBASIC18.81■□□□□ 0.6
LTN1O94822 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 RBM4-207ENST00000506523 654 ntTSL 3 BASIC18.81■□□□□ 0.6
LTN1O94822 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LTN1O94822 AL009176.1-201ENST00000607876 650 ntBASIC18.81■□□□□ 0.6
LTN1O94822 ESR1-214ENST00000638569 132 ntTSL 5 BASIC18.81■□□□□ 0.6
LTN1O94822 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LTN1O94822 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LTN1O94822 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LTN1O94822 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LTN1O94822 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LTN1O94822 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LTN1O94822 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LTN1O94822 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LTN1O94822 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC18.8■□□□□ 0.6
LTN1O94822 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LTN1O94822 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LTN1O94822 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LTN1O94822 AC138761.6-201ENST00000583997 1423 ntBASIC18.8■□□□□ 0.6
LTN1O94822 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC18.8■□□□□ 0.6
LTN1O94822 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LTN1O94822 PSAT1P2-201ENST00000426107 972 ntBASIC18.8■□□□□ 0.6
LTN1O94822 RPL3P5-201ENST00000441645 1232 ntBASIC18.8■□□□□ 0.6
LTN1O94822 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC18.8■□□□□ 0.6
LTN1O94822 CD81-209ENST00000492627 886 ntTSL 3 BASIC18.8■□□□□ 0.6
LTN1O94822 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC18.8■□□□□ 0.6
LTN1O94822 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms